RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 A0A1W2PRS3 328 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 KIR3DP1A8MWS1 328 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 SDCBPO00560 298 aaPredicted RBP14□□□□□ -0.17
SHQ1-202ENST00000444040 DNPH1O43598 174 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 STARP49675 285 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 MAFIPQ8WZ33 124 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 SPTSSAQ969W0 71 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 SGCZQ96LD1 299 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 SLC39A1Q9NY26 324 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 CSAG2Q9Y5P2 127 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 SERPINE3A8MV23 424 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 CYCSP99999 105 aaKnown RBP13.99□□□□□ -0.17
SHQ1-202ENST00000444040 SLC9A3R2Q15599 337 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 PAN3Q58A45 887 aaKnown RBP13.99□□□□□ -0.17
SHQ1-202ENST00000444040 CSNK2A3Q8NEV1 391 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 SCGB3A2Q96PL1 93 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 ARPC5LQ9BPX5 153 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 RAB18Q9NP72 206 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 GJE1A6NN92 205 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 H0YIZ8 118 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 CA11O75493 328 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 ADAP1O75689 374 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 PGAM2P15259 253 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 RPS2P15880 293 aaKnown RBP13.99□□□□□ -0.17
SHQ1-202ENST00000444040 CPT2P23786 658 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 ACKR3P25106 362 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 SRD5A2P31213 254 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 OR3A2P47893 321 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 TAS2R46P59540 309 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 Q0VFX4 171 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 SNTB1Q13884 538 aaKnown RBP13.99□□□□□ -0.17
SHQ1-202ENST00000444040 ANKRD55Q3KP44 614 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 Q7L0L9 218 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 YRDCQ86U90 279 aaKnown RBP13.99□□□□□ -0.17
SHQ1-202ENST00000444040 GGNQ86UU5 652 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 TMEM17Q86X19 198 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 OR5AP2Q8NGF4 316 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 OR52H1Q8NGJ2 320 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 MS4A7Q9GZW8 240 aaPredicted RBP13.99□□□□□ -0.17
SHQ1-202ENST00000444040 PRR13Q9NZ81 148 aa13.99□□□□□ -0.17
SHQ1-202ENST00000444040 F5H0A9 414 aaPredicted RBP13.98□□□□□ -0.17
SHQ1-202ENST00000444040 SYNGR3O43761 229 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 HGFACQ04756 655 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 PXDC1Q5TGL8 231 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 NSUN5P2Q63ZY6 315 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 GPR137CQ8N3F9 429 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 RHBDD1Q8TEB9 315 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 ROBO4Q8WZ75 1007 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 S100A13Q99584 98 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 PRDM6Q9NQX0 595 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 EHFQ9NZC4 300 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 VPS13AQ96RL7 3174 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 TEX13DA0A0J9YY54 714 aaPredicted RBP13.98□□□□□ -0.17
SHQ1-202ENST00000444040 A0A1B0GW55 424 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 ZNF716A6NP11 495 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 MPTX1A8MV57 137 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 HTR3BO95264 441 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 CER1O95813 267 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 DUX4L2P0CJ85 424 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 DUX4L3P0CJ86 424 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 DUX4L4P0CJ87 422 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 DUX4L5P0CJ88 424 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 DUX4L6P0CJ89 424 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 DUX4L7P0CJ90 424 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 CNR1P21554 472 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 TAGLNQ01995 201 aaKnown RBP13.98□□□□□ -0.17
SHQ1-202ENST00000444040 RAB35Q15286 201 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 SMUG1Q53HV7 270 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 DRAM2Q6UX65 266 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 PPP1R32Q7Z5V6 425 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 CDC6Q99741 560 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 DUX4Q9UBX2 424 aa13.98□□□□□ -0.17
SHQ1-202ENST00000444040 SDK2Q58EX2 2172 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 IGKV1D-8A0A087WSZ0 117 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 CCDC187A0A096LP49 1063 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 F8VVB4 439 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 F8VWA3 439 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 BET1O15155 118 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 SGCEO43556 437 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 GLRA1P23415 457 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 RPS18P62269 152 aaKnown RBP13.97□□□□□ -0.17
SHQ1-202ENST00000444040 PPIAP62937 165 aaKnown RBP13.97□□□□□ -0.17
SHQ1-202ENST00000444040 BTN1A1Q13410 526 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 ARL6IP1Q15041 203 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 TRIM61Q5EBN2 209 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 GALNTL5Q7Z4T8 443 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 C6orf201Q7Z4U5 140 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 SULF2Q8IWU5 870 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 SEMA6DQ8NFY4 1073 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 OR2AE1Q8NHA4 323 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 RRNAD1Q96FB5 475 aaKnown RBP13.97□□□□□ -0.17
SHQ1-202ENST00000444040 PIK3IP1Q96FE7 263 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 Q96M66 194 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 CRLF2Q9HC73 371 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 GPR173Q9NS66 373 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 MCTS1Q9ULC4 181 aaKnown RBP13.97□□□□□ -0.17
SHQ1-202ENST00000444040 FIGNL2A6NMB9 653 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 DHRS7CA6NNS2 312 aa13.97□□□□□ -0.17
SHQ1-202ENST00000444040 CST2P09228 141 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms