RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 GP6Q9HCN6 339 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 NPDC1Q9NQX5 325 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 NKIRAS2Q9NYR9 191 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 MRPL15Q9P015 296 aaKnown RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF69Q9UC07 566 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ANAPC10Q9UM13 185 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 NCOA6Q14686 2063 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 TMEM82A0PJX8 343 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 TMEM235A6NFC5 223 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 SERPINE3A8MV23 424 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF587BE7ETH6 402 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 RPL36A-HNRNPH2H7BZ11 118 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 FABP7O15540 132 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 LMX1BO60663 402 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 CDC14BO60729 498 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 CD3DP04234 171 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 AMY2AP04746 511 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 RFPL3SP0C7P2 107 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 GSTT2P0CG29 244 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 COX5BP10606 129 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 SLC2A1P11166 492 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 HIST1H1DP16402 221 aaKnown RBP7.98□□□□□ -1.13
HDAC6-209ENST00000440653 PRKACBP22694 351 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 CPT2P23786 658 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 DNASE1P24855 282 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 LHX2P50458 406 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 CLDN18P56856 261 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 TAS2R31P59538 309 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 GNG2P59768 71 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 UBE2MP61081 183 aaKnown RBP7.98□□□□□ -1.13
HDAC6-209ENST00000440653 DHODHQ02127 395 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 PLGLB1Q02325 96 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 GUCA2AQ02747 115 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 DEFB109BQ30KR1 87 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 GFOD2Q3B7J2 385 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 PRR30Q53SZ7 412 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-209ENST00000440653 FAHD2BQ6P2I3 314 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-209ENST00000440653 GLIPR1L1Q6UWM5 242 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 CHMP1BQ7LBR1 199 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 TRAPPC6BQ86SZ2 158 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 BIVMQ86UB2 503 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 NAA40Q86UY6 237 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 ARRDC1Q8N5I2 433 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 TMEM178AQ8NBL3 297 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 ACBD4Q8NC06 268 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 MDS2Q8NDY4 140 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 SEMA6DQ8NFY4 1073 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 SNAPC3Q92966 411 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 FAHD2AQ96GK7 314 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 S100A13Q99584 98 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 TMPRSS13Q9BYE2 586 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 PRDM14Q9GZV8 571 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 BCO1Q9HAY6 547 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 CRLF2Q9HC73 371 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 GPR35Q9HC97 309 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 DLL4Q9NR61 685 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 MGAT4CQ9UBM8 478 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 NOSIPQ9Y314 301 aaKnown RBP7.98□□□□□ -1.13
HDAC6-209ENST00000440653 HSPB11Q9Y547 144 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 TIMM10BQ9Y5J6 103 aa7.98□□□□□ -1.13
HDAC6-209ENST00000440653 F5H5K5 113 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 H3BUI4 141 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF780AO75290 641 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-209ENST00000440653 MRPL33O75394 65 aaKnown RBP7.97□□□□□ -1.13
HDAC6-209ENST00000440653 PDGFAP04085 211 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 RLN1P04808 185 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 PTHLHP12272 177 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 B4GALT1P15291 398 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 ABOP16442 354 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 HTR5AP47898 357 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 CLDN15P56746 228 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 TAS2R46P59540 309 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 RPS27AP62979 156 aaKnown RBP7.97□□□□□ -1.13
HDAC6-209ENST00000440653 SF3B4Q15427 424 aaKnown RBP eCLIP7.97□□□□□ -1.138e-7■■■■□ 21.6
HDAC6-209ENST00000440653 CEACAM16Q2WEN9 425 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 ATP1A1-AS1Q5TC04 95 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 IDO2Q6ZQW0 420 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 LHFPL2Q6ZUX7 228 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 SLC16A14Q7RTX9 510 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.97□□□□□ -1.13
HDAC6-209ENST00000440653 FJX1Q86VR8 437 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 ANGPTL5Q86XS5 388 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 GALNT16Q8N428 558 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 LRRC18Q8N456 261 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 ZFP62Q8NB50 900 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-209ENST00000440653 OR51S1Q8NGJ8 323 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 LILRB4Q8NHJ6 448 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF431Q8TF32 576 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-209ENST00000440653 TNFAIP8L1Q8WVP5 186 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 HAS2Q92819 552 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 RAB3CQ96E17 227 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 FBXO17Q96EF6 278 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 C1orf147Q96MC9 270 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-209ENST00000440653 GPR137Q96N19 417 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 SIGLEC12Q96PQ1 595 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 TM2D1Q9BX74 207 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 OR2H1Q9GZK4 316 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 LPAR5Q9H1C0 372 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 ACKR4Q9NPB9 350 aa7.97□□□□□ -1.13
HDAC6-209ENST00000440653 PCDHB16Q9NRJ7 776 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms