RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FCRLAQ7L513 359 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 DPY19L4Q7Z388 723 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 LRRTM1Q86UE6 522 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SIAH3Q8IW03 269 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 TCTE3Q8IZS6 198 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 TOMM5Q8N4H5 51 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GCSAMQ8N6F7 178 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 EID2Q8N6I1 236 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF433Q8N7K0 673 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF676Q8N7Q3 588 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR6N2Q8NGY6 317 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 MFSD8Q8NHS3 518 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 OTOSQ8NHW6 89 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF519Q8TB69 540 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 LGALS14Q8TCE9 139 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GPR148Q8TDV2 347 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SAP25Q8TEE9 199 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 RGP1Q92546 391 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 NSMAFQ92636 917 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 THRSPQ92748 146 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 BCL2L2Q92843 193 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 NAT6Q93015 286 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 HGDQ93099 445 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 YIPF5Q969M3 257 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 DDIT4LQ96D03 193 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZFP3Q96NJ6 502 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 DERL3Q96Q80 235 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR8B4Q96RC9 309 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 CDX2Q99626 313 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 KLHDC3Q9BQ90 382 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SPXQ9BT56 116 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SYT4Q9H2B2 425 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ELOVL3Q9HB03 270 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF275Q9NSD4 429 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SLCO1C1Q9NYB5 712 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 MRPL39Q9NYK5 338 aaKnown RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 MED11Q9P086 117 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 RCC2Q9P258 522 aaKnown RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 COPZ2Q9P299 210 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 GAGE2DQ9UEU5 116 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 C19orf25Q9UFG5 118 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 PILRBQ9UKJ0 227 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 CLEC4AQ9UMR7 237 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 TCF19Q9Y242 345 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 MRPS7Q9Y2R9 242 aaKnown RBP2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 KLHDC2Q9Y2U9 406 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 NUBP2Q9Y5Y2 271 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 ALG5Q9Y673 324 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 HTTP42858 3142 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 TMEM131Q92545 1883 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 SCN3AQ9NY46 2000 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 DNAH12Q6ZR08 3092 aa2.98□□□□□ -1.93
HMGB3P11-201ENST00000440127 FANCMQ8IYD8 2048 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 IGLV1-36A0A0B4J1U3 117 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A0B4J203 849 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 A0A1B0GTH9 108 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 TRABD2BA6NFA1 517 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 OR4C45A6NMZ5 311 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 C17orf51A8MQB3 221 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FTCDNL1E5RQL4 147 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 NPIPA5E9PKD4 350 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 GPR171O14626 319 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 TP53I11O14683 189 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 XRCC3O43542 346 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZIC3O60481 467 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF354AO60765 605 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 NDUFS7O75251 213 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF254O75437 659 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 KHDRBS3O75525 346 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 LDOC1O95751 146 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MAS1P04201 325 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 TCRBP04435 133 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 RLN1P04808 185 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 KLK3P07288 261 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FGF5P12034 268 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FOSL2P15408 326 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 CTLA4P16410 223 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF823P16415 610 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MPZP25189 248 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FKBP2P26885 142 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 DPP4P27487 766 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ERP29P30040 261 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 BDKRB2P30411 391 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MNDAP41218 407 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 WNT5AP41221 380 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MAGEB1P43366 347 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 KIR3DL2P43630 455 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SRP9P49458 86 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 ASCL1P50553 236 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 DAP3P51398 398 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 RIDAP52758 137 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 RAG2P55895 527 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 FBXW4P57775 412 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 AP3S2P59780 193 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MRPS10P82664 201 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 IFITM2Q01629 132 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 PUDPQ08623 228 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 MAB21L1Q13394 359 aa2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 SNTB2Q13425 540 aaKnown RBP2.97□□□□□ -1.93
HMGB3P11-201ENST00000440127 EIF2B1Q14232 305 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms