RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SLC16A6O15403 523 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 SYT7O43581 403 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 ENSAO43768 121 aaKnown RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 SRSF10O75494 262 aaKnown RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 FADS2O95864 444 aaKnown RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 RPSAP08865 295 aaKnown RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 PPIAL4GP0DN37 164 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 ADRA2CP18825 462 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 EPHA1P21709 976 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 GLRA1P23415 457 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 CSNK2BP67870 215 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 PAX8Q06710 450 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 MFGE8Q08431 387 aaPredicted RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 KLHL22Q53GT1 634 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 CEP78Q5JTW2 689 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 TMEM244Q5VVB8 128 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 TTC23Q5W5X9 447 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 RBMS3Q6XE24 437 aaKnown RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 C1orf229Q6ZS94 237 aaPredicted RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 SSX6Q7RTT6 188 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 WDR86Q86TI4 376 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 ZNF573Q86YE8 665 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 PNLDC1Q8NA58 520 aaKnown RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 SCCPDHQ8NBX0 429 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 OR14K1Q8NGZ2 314 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 RHOXF1Q8NHV9 184 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 SPATA3Q8NHX4 192 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 RPL3LQ92901 407 aaKnown RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 TMIGD2Q96BF3 282 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 C10orf35Q96D05 121 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 MDFIQ99750 246 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 DNTTIP1Q9H147 329 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 SMPD3Q9NY59 655 aaPredicted RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 GNG8Q9UK08 70 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 NUP50Q9UKX7 468 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 SLC7A11Q9UPY5 501 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 SLC22A13Q9Y226 551 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 EXOGQ9Y2C4 368 aaKnown RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 RPL36Q9Y3U8 105 aaKnown RBP8.73□□□□□ -1.01
MCF2L-216ENST00000439475 V9GYS6 101 aa8.73□□□□□ -1.01
MCF2L-216ENST00000439475 NSD1Q96L73 2696 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-216ENST00000439475 NKX6-3A6NJ46 265 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 E9PQ18 207 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 TNFRSF13BO14836 293 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-216ENST00000439475 NDUFB3O43676 98 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 GATBO75879 557 aaKnown RBP8.72□□□□□ -1.01
MCF2L-216ENST00000439475 HTR1AP08908 422 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 UBCP0CG48 685 aaKnown RBP8.72□□□□□ -1.01
MCF2L-216ENST00000439475 FAHP16930 419 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 EGR1P18146 543 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 GPM6AP51674 278 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 ACTA2P62736 377 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 ACTG2P63267 376 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 ZNF85Q03923 595 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 MRPL28Q13084 256 aaKnown RBP8.72□□□□□ -1.01
MCF2L-216ENST00000439475 TP53I3Q53FA7 332 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 LRRC10Q5BKY1 277 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 ZNF841Q6ZN19 808 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 USP43Q70EL4 1123 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 CATSPERDQ86XM0 798 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 ENTHD1Q8IYW4 607 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 PACRGLQ8N7B6 248 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 HAVCR2Q8TDQ0 301 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 HPSE2Q8WWQ2 592 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 RORBQ92753 470 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 MED30Q96HR3 178 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 MBOAT4Q96T53 435 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 MS4A7Q9GZW8 240 aaPredicted RBP8.72□□□□□ -1.01
MCF2L-216ENST00000439475 OR51I2Q9H344 312 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 PPP1R3EQ9H7J1 279 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 NEK6Q9HC98 313 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 INPP5EQ9NRR6 644 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 RASL12Q9NYN1 266 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 OPN4Q9UHM6 478 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 POLDIP2Q9Y2S7 368 aa8.72□□□□□ -1.01
MCF2L-216ENST00000439475 IGHV3OR15-7A0A075B7D8 119 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 A0A1B0GTI1 187 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 IRGMA1A4Y4 181 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 TRIM77I1YAP6 450 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 J3QLW9 94 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 DVL1O14640 695 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 AKR7A2O43488 359 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 DBTP11182 482 aaKnown RBP8.71□□□□□ -1.02
MCF2L-216ENST00000439475 ZNF19P17023 458 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 CCL1P22362 96 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 BPIFB3P59826 476 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 RAB40BQ12829 278 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 LRRC36Q1X8D7 754 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 ODF4Q2M2E3 257 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 CDONQ4KMG0 1287 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 WDR38Q5JTN6 314 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 ATPAF1Q5TC12 328 aaPredicted RBP8.71□□□□□ -1.02
MCF2L-216ENST00000439475 LPCAT4Q643R3 524 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 HAGHLQ6PII5 290 aaPredicted RBP8.71□□□□□ -1.02
MCF2L-216ENST00000439475 Q6ZSR3 168 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 FAM90A1Q86YD7 464 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 DHRSXQ8N5I4 330 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 SETD9Q8NE22 299 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 DMRTB1Q96MA1 342 aa8.71□□□□□ -1.02
MCF2L-216ENST00000439475 CCL13Q99616 98 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms