RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 UBE2V2Q15819 145 aa8.31□□□□□ -1.08
CUX1-206ENST00000437600 SNAI3Q3KNW1 292 aa8.31□□□□□ -1.08
CUX1-206ENST00000437600 C1orf100Q5SVJ3 147 aa8.31□□□□□ -1.08
CUX1-206ENST00000437600 C5orf46Q6UWT4 87 aa8.31□□□□□ -1.08
CUX1-206ENST00000437600 C20orf196Q8IYI0 205 aa8.31□□□□□ -1.08
CUX1-206ENST00000437600 C15orf40Q8WUR7 153 aa8.31□□□□□ -1.08
CUX1-206ENST00000437600 PSMF1Q92530 271 aa8.31□□□□□ -1.08
CUX1-206ENST00000437600 PNPLA2Q96AD5 504 aa8.31□□□□□ -1.08
CUX1-206ENST00000437600 ZNF98A6NK75 572 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 AQP7P3A6NL99 342 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 SNRPGP15A8MWD9 76 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 CSNK1A1P48729 337 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 IL13RA1P78552 427 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 QRFPP83859 136 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 ZNF546Q86UE3 836 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 OR6X1Q8NH79 312 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 AKR7LQ8NHP1 331 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 ZBTB8AQ96BR9 441 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 FBXO17Q96EF6 278 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 ZNF845Q96IR2 970 aaPredicted RBP8.3□□□□□ -1.08
CUX1-206ENST00000437600 SIGLEC12Q96PQ1 595 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 HDHD3Q9BSH5 251 aaPredicted RBP8.3□□□□□ -1.08
CUX1-206ENST00000437600 ANGPTL4Q9BY76 406 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 LPAR5Q9H1C0 372 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 CRLF2Q9HC73 371 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 RAB22AQ9UL26 194 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 ZNF175Q9Y473 711 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 COL12A1Q99715 3063 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 ITPR1Q14643 2758 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 IGLV3-32A0A0A0MS00 114 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 FAM221AA4D161 298 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 RAB19A4D1S5 217 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 RLN2P04090 185 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 IFNA6P05013 189 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 CELA3AP09093 270 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 S100A11P31949 105 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 SUCLG1P53597 346 aaKnown RBP8.3□□□□□ -1.08
CUX1-206ENST00000437600 SCRN3Q0VDG4 424 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 ARFRP1Q13795 201 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 SLC9A3R2Q15599 337 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 ARMC10Q8N2F6 343 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 BHLHE23Q8NDY6 225 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 AQP3Q92482 292 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 TMPRSS13Q9BYE2 586 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 SPRY4Q9C004 299 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 SHARPINQ9H0F6 387 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 LRFN1Q9P244 771 aa8.3□□□□□ -1.08
CUX1-206ENST00000437600 OR5H14A6NHG9 310 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 HSPB2A8KAH6 182 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 PRSS44E7EML9 344 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 PROB1E7EW31 1015 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 SPRY1O43609 319 aaPredicted RBP8.29□□□□□ -1.08
CUX1-206ENST00000437600 CXCL13O43927 109 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 CD63P08962 238 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 FCGR2AP12318 317 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 CCL2P13500 99 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 CEACAM1P13688 526 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 B4GALT1P15291 398 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 FSTP19883 344 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 RPL35P42766 123 aaKnown RBP8.29□□□□□ -1.08
CUX1-206ENST00000437600 CYB561P49447 251 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 ATP1B3P54709 279 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 RRADP55042 308 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 FOXC1Q12948 553 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 HSPB2Q16082 182 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 DEGS2Q6QHC5 323 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 GTPBP8Q8N3Z3 284 aaPredicted RBP8.29□□□□□ -1.08
CUX1-206ENST00000437600 ZIC4Q8N9L1 334 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 TMEM229BQ8NBD8 167 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 OR51T1Q8NGJ9 327 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 OR10R2Q8NGX6 335 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 OR4K15Q8NH41 348 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 FGFBP3Q8TAT2 258 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 PCDHB16Q9NRJ7 776 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 PIGLQ9Y2B2 252 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 PTPRQQ9UMZ3 2332 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 TRAV14DV4A0A0A6YYC5 116 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 TRAV20A0A0B4J274 112 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 A0A1W2PNV4 684 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 LOC390937A0A1W2PQ73 354 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 FAM166BA8MTA8 275 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 CCNOP22674 350 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 GABRR1P24046 479 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 GDF1P27539 372 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 CD34P28906 385 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 H3F3AP84243 136 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 KISS1Q15726 138 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 MICBQ29980 383 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 SLC25A53Q5H9E4 307 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 NKAPLQ5M9Q1 402 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 ZNF774Q6NX45 483 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 UNQ6126/PRO20091Q6UXV3 157 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 C6orf201Q7Z4U5 140 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 C5orf24Q7Z6I8 188 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 FOXRED2Q8IWF2 684 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 PPP1R1CQ8WVI7 109 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 DYRK2Q92630 601 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 RAB3CQ96E17 227 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 ZNF75AQ96N20 296 aa8.29□□□□□ -1.08
CUX1-206ENST00000437600 GPR173Q9NS66 373 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms