RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 EEF1E1-BLOC1S5C9J1V9 151 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 CLN5O75503 358 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 ZFAND5O76080 213 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 DKK1O94907 266 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 SNRNP70P08621 437 aaKnown RBP9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 ZNF20P17024 532 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 PI3P19957 117 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 STARD6P59095 220 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 C1QL2Q7Z5L3 287 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 ISOC2Q96AB3 205 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 CCDC74BQ96LY2 380 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 ZNF107Q9UII5 783 aaPredicted RBP9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 IGHV3-15A0A0B4J1V0 119 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 G3V3Y1 287 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 GP1BAP07359 652 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 RPS27AP62979 156 aaKnown RBP9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 UBA52P62987 128 aaKnown RBP9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 MICBQ29980 383 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 PHYHD1Q5SRE7 291 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 TMEM200AQ86VY9 491 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 OR2AJ1Q8NGZ0 328 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 MITD1Q8WV92 249 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 ROBO4Q8WZ75 1007 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 GTF3AQ92664 365 aaKnown RBP9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 EDAQ92838 391 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 TMEM41AQ96HV5 264 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 TOLLIPQ9H0E2 274 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 MRPS28Q9Y2Q9 187 aaKnown RBP9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 A0A1W2PPE3 182 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 BTBD17A6NE02 478 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 IL2RAP01589 272 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 MGMTP16455 207 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 CX3CR1P49238 355 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 HABP2Q14520 560 aaPredicted RBP9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 CRIP3Q6Q6R5 217 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 KCNRGQ8N5I3 272 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 OR5L2Q8NGL0 311 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 MAFIPQ8WZ33 124 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 SPACA9Q96E40 222 aaPredicted RBP9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 CBY1Q9Y3M2 126 aa9.17□□□□□ -0.94
CLSTN1-203ENST00000435891 IGLV3-32A0A0A0MS00 114 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 H7C1Q1 480 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 ZNF43P17038 809 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 SRSF4Q08170 494 aaKnown RBP9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 EIF4E3Q8N5X7 224 aaKnown RBP9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 OR4K15Q8NH41 348 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 ARL11Q969Q4 196 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 C20orf24Q9BUV8 137 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 WASF3Q9UPY6 502 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 CHCHD2Q9Y6H1 151 aaPredicted RBP9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 CDC14BO60729 498 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 MBP02144 154 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 EPHA8P29322 1005 aaPredicted RBP9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 CLDN17P56750 224 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 BHLHE23Q8NDY6 225 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 POM121Q96HA1 1249 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 ARHGAP5-AS1Q96IT6 56 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 TMEM68Q96MH6 324 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 DEFB126Q9BYW3 111 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 BARX1Q9HBU1 254 aaPredicted RBP9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 FRYQ5TBA9 3013 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 SNAPC5O75971 98 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 HCKP08631 526 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 MSX1P28360 303 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 DLSTP36957 453 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 NPY4RP50391 375 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 HIST3H3Q16695 136 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 ETV3LQ6ZN32 361 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 FOXRED2Q8IWF2 684 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 ZNF283Q8N7M2 679 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 OR6X1Q8NH79 312 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 LYZL4Q96KX0 146 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 GNRHR2Q96P88 292 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 GGACTQ9BVM4 153 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 OR2S2Q9NQN1 319 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 SMCO4Q9NRQ5 59 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 RASL12Q9NYN1 266 aa9.16□□□□□ -0.94
CLSTN1-203ENST00000435891 TOX3O15405 576 aaPredicted RBP9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 SFTPCP11686 197 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 EDN3P14138 238 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 MPZP25189 248 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 ZDHHC22Q8N966 263 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 OR4K17Q8NGC6 315 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 RAB3CQ96E17 227 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 OXGR1Q96P68 337 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 ZNF385AQ96PM9 386 aaKnown RBP9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 UCN2Q96RP3 112 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 CLCC1Q96S66 551 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 C13orf42A0A1B0GVH6 325 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 SULT2B1O00204 365 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 CRTAPO75718 401 aaPredicted RBP9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 IFNA6P05013 189 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 AGTR1P30556 359 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 CXCL12P48061 93 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 DHPSP49366 369 aaPredicted RBP9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 DHRS7BQ6IAN0 325 aaPredicted RBP9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 PPP1R3BQ86XI6 285 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 ZNF561Q8N587 486 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 ASB13Q8WXK3 278 aa9.15□□□□□ -0.94
CLSTN1-203ENST00000435891 TMEM230Q96A57 120 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms