RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 COL21A1Q96P44 957 aa3.22□□□□□ -1.89
PTP4A1P3-201ENST00000433661 TEKT3Q9BXF9 490 aa3.22□□□□□ -1.89
PTP4A1P3-201ENST00000433661 PDP1Q9P0J1 537 aaPredicted RBP3.22□□□□□ -1.89
PTP4A1P3-201ENST00000433661 UVRAGQ9P2Y5 699 aa3.22□□□□□ -1.89
PTP4A1P3-201ENST00000433661 MYO16Q9Y6X6 1858 aa3.22□□□□□ -1.89
PTP4A1P3-201ENST00000433661 C2orf16Q68DN1 1984 aa3.21□□□□□ -1.89
PTP4A1P3-201ENST00000433661 A0A1W2PRD5 423 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 FLOT1O75955 427 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 FABP3P05413 133 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CTSLP07711 333 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 RALBP11234 206 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 RAB4AP20338 218 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 MAGP20916 626 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CEACAM6P40199 344 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CSNK1A1P48729 337 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 UCNP55089 124 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 GGTLC2Q14390 218 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 GINS1Q14691 196 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 MBOAT1Q6ZNC8 495 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 MBOAT2Q6ZWT7 520 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 OR52E5Q8NH55 327 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 TCEAL3Q969E4 200 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 ZNF285Q96NJ3 590 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 MICU1Q9BPX6 476 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CCDC94Q9BW85 323 aaPredicted RBP3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 TMEM38AQ9H6F2 299 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 ZNHIT6Q9NWK9 470 aaKnown RBP3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 MRPL22Q9NWU5 206 aaKnown RBP3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CFAP45Q9UL16 551 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 DCHS2Q6V1P9 2916 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 PIKFYVEQ9Y2I7 2098 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 ACANP16112 2415 aa3.21□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CUBNO60494 3623 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 IGLV3-16A0A075B6K0 115 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 VPS37CA5D8V6 355 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 NCBP2LA6PVI3 153 aaKnown RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 H0YC42 278 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 TRDMT1O14717 391 aaKnown RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 ERI3O43414 337 aaKnown RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 AIREO43918 545 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 HPRT1P00492 218 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 BCHEP06276 602 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 IGFBP3P17936 291 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 RAB3AP20336 220 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CXCL12P48061 93 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 VSX2P58304 361 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 ZNF121P58317 390 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CDH17Q12864 832 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 KIR2DS1Q14954 304 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 PIP5KL1Q5T9C9 394 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 OR52W1Q6IF63 320 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 C11orf72Q8NBR9 251 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 OR52E2Q8NGJ4 325 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 ZNF75CPQ92670 426 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 BMFQ96LC9 184 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 SDHCQ99643 169 aaPredicted RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 SYNDIG1Q9H7V2 258 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CCNB1IP1Q9NPC3 277 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 RCL1Q9Y2P8 373 aaKnown RBP3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 Q9Y3F1 56 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 TACC2O95359 2948 aa3.2□□□□□ -1.9
PTP4A1P3-201ENST00000433661 SDK2Q58EX2 2172 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 MYH2Q9UKX2 1941 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 A0A0U1RQV1 116 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 LINC00854A0A1B0GVQ3 168 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 TSPAN11A1L157 253 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 SUPT3HB4E1H0 165 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 C11orf94C9JXX5 98 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 TMX2-CTNND1H3BSU7 103 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 BCKDKO14874 412 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 FCN3O75636 299 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 LSM8O95777 96 aaKnown RBP3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CLTAP09496 248 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 U2AF2P26368 475 aaKnown RBP eCLIP3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 SLC11A1P49279 550 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 PPOXP50336 477 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 SYNJ2BPP57105 145 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 DAOAP59103 153 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 RAB11AP62491 216 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 ESRRGP62508 458 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 IRF8Q02556 426 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 RGNQ15493 299 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 RAB11BQ15907 218 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 ZSCAN26Q16670 478 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 TPTE2P1Q5T6R2 138 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 GPR107Q5VW38 600 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 Q5W150 140 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 PLCXD3Q63HM9 321 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 H3F3CQ6NXT2 135 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 BHLHA15Q7RTS1 189 aaPredicted RBP3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CHST4Q8NCG5 386 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 EEF1AKMT3Q96AZ1 226 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 FOPNLQ96NB1 174 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 CLSTN2Q9H4D0 955 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 RETNQ9HD89 108 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 HMG20AQ9NP66 347 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 PTTG3PQ9NZH4 202 aa3.19□□□□□ -1.9
PTP4A1P3-201ENST00000433661 ZNF282Q9UDV7 671 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms