RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 OR52N1Q8NH53 320 aa13.07□□□□□ -0.32
TREX1-201ENST00000433541 TRMT10AQ8TBZ6 339 aaKnown RBP13.07□□□□□ -0.32
TREX1-201ENST00000433541 PDCD1LG2Q9BQ51 273 aa13.07□□□□□ -0.32
TREX1-201ENST00000433541 ZNF665Q9H7R5 613 aa13.07□□□□□ -0.32
TREX1-201ENST00000433541 LPAR2Q9HBW0 351 aa13.07□□□□□ -0.32
TREX1-201ENST00000433541 ERVK-18Q9QC07 812 aa13.07□□□□□ -0.32
TREX1-201ENST00000433541 BLOC1S6Q9UL45 172 aa13.07□□□□□ -0.32
TREX1-201ENST00000433541 SLC7A11Q9UPY5 501 aa13.07□□□□□ -0.32
TREX1-201ENST00000433541 PPIAL4AQ9Y536 164 aa13.07□□□□□ -0.32
TREX1-201ENST00000433541 DOCK11Q5JSL3 2073 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 CSPG4Q6UVK1 2322 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 PNMA8CA0A1B0GUJ8 204 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 FAM230AA0A1W2PPH8 454 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 OR5B21A6NL26 309 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 C3orf80F5H4A9 247 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 CDIPTO14735 213 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 LMX1BO60663 402 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 IGHV2-70P01814 119 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 IGHV4-31P0DP07 118 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 C21orf33P30042 268 aaPredicted RBP13.06□□□□□ -0.32
TREX1-201ENST00000433541 CD80P33681 288 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 THBS2P35442 1172 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 MDH2P40926 338 aaKnown RBP13.06□□□□□ -0.32
TREX1-201ENST00000433541 ZMYND11Q15326 602 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 ZNF181Q2M3W8 571 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 SFRP4Q6FHJ7 346 aaPredicted RBP13.06□□□□□ -0.32
TREX1-201ENST00000433541 RPL22L1Q6P5R6 122 aaKnown RBP13.06□□□□□ -0.32
TREX1-201ENST00000433541 OR5A2Q8NGI9 324 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 Q8TCH9 128 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 LRRC29Q8WV35 223 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 HPSE2Q8WWQ2 592 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 RPL3LQ92901 407 aaKnown RBP13.06□□□□□ -0.32
TREX1-201ENST00000433541 FGGYQ96C11 551 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 ZNF649Q9BS31 505 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 BABAM2Q9NXR7 383 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 DHDHQ9UQ10 334 aa13.06□□□□□ -0.32
TREX1-201ENST00000433541 ZNF469Q96JG9 3925 aaPredicted RBP13.06□□□□□ -0.32
TREX1-201ENST00000433541 OR4C45A6NMZ5 311 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 CD5LO43866 347 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 ZFPL1O95159 310 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 TGFAP01135 160 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 ISG15P05161 165 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 CDK1P06493 297 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 RPSAP08865 295 aaKnown RBP13.05□□□□□ -0.32
TREX1-201ENST00000433541 RPS2P15880 293 aaKnown RBP13.05□□□□□ -0.32
TREX1-201ENST00000433541 PMELP40967 661 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 TGM4P49221 684 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 WNT4P56705 351 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 TAS2R43P59537 309 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 CNN3Q15417 329 aaKnown RBP13.05□□□□□ -0.32
TREX1-201ENST00000433541 CCDC58Q4VC31 144 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 WDR86Q86TI4 376 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 ZFP41Q8N8Y5 198 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 SCCPDHQ8NBX0 429 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 OR51A4Q8NGJ6 313 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 OR10AC1Q8NH08 325 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 PP6455Q8WZ26 134 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 RNF166Q96A37 237 aaPredicted RBP13.05□□□□□ -0.32
TREX1-201ENST00000433541 MND1Q9BWT6 205 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 METTL17Q9H7H0 456 aaPredicted RBP13.05□□□□□ -0.32
TREX1-201ENST00000433541 DNAJB11Q9UBS4 358 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 MALRD1Q5VYJ5 2156 aa13.05□□□□□ -0.32
TREX1-201ENST00000433541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.05□□□□□ -0.32
TREX1-201ENST00000433541 ABCA2Q9BZC7 2435 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 RGS10O43665 173 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 HAAOP46952 286 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 CDK5R1Q15078 307 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 MED22Q15528 200 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 KCNJ8Q15842 424 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 TMEM155Q4W5P6 130 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 RBM48Q5RL73 367 aaKnown RBP13.04□□□□□ -0.32
TREX1-201ENST00000433541 XAF1Q6GPH4 301 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 FAM166AQ6J272 317 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 HAGHLQ6PII5 290 aaPredicted RBP13.04□□□□□ -0.32
TREX1-201ENST00000433541 LRRC28Q86X40 367 aaPredicted RBP13.04□□□□□ -0.32
TREX1-201ENST00000433541 LINC01356Q8N9X3 169 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 C10orf35Q96D05 121 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 MSI2Q96DH6 328 aaKnown RBP13.04□□□□□ -0.32
TREX1-201ENST00000433541 BORCS8Q96FH0 119 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 TECTBQ96PL2 329 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 CHST5Q9GZS9 411 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
TREX1-201ENST00000433541 TRAV38-1A0A0B4J264 116 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 B4DSR2 109 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 AKR7A2O43488 359 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 PTBP3O95758 552 aaKnown RBP13.03□□□□□ -0.32
TREX1-201ENST00000433541 PLATP00750 562 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 IGHV2-5P01817 119 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 CD2P06729 351 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 SOX2P48431 317 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 HOXA4Q00056 320 aaPredicted RBP13.03□□□□□ -0.32
TREX1-201ENST00000433541 ESCO2Q56NI9 601 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 WDR82Q6UXN9 313 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 NLRC3Q7RTR2 1065 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 GLCCI1Q86VQ1 547 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 ZNF573Q86YE8 665 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 OR51F2Q8NH61 342 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 ZNF671Q8TAW3 534 aa13.03□□□□□ -0.32
TREX1-201ENST00000433541 GPR148Q8TDV2 347 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms