RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 SPEM2Q0P670 501 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 LRRC37A5PQ49AS3 106 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 TUSC5Q8IXB3 177 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 TMEM251Q8N6I4 163 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 SEMA6DQ8NFY4 1073 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 CASTOR1Q8WTX7 329 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 CCDC107Q8WV48 283 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 PP6455Q8WZ26 134 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 GPR87Q9BY21 358 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 TMPRSS13Q9BYE2 586 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 MRPS18CQ9Y3D5 142 aaKnown RBP12.76□□□□□ -0.37
RFTN1-203ENST00000432519 EFSO43281 561 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 HOXD11P31277 338 aaPredicted RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 NPY4RP50391 375 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 MTCP1P56278 107 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 ARFRP1Q13795 201 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 HLXQ14774 488 aaPredicted RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 DRAM2Q6UX65 266 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 BATF2Q8N1L9 274 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 PNLDC1Q8NA58 520 aaKnown RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 OR56B1Q8NGI3 324 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 LOXL4Q96JB6 756 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 NUDT16L1Q9BRJ7 211 aaKnown RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 MCTS1Q9ULC4 181 aaKnown RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 ANAPC10Q9UM13 185 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 C9orf170A2RU37 121 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 C21orf140B9A014 251 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 GSTP1P09211 210 aaKnown RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 MMP7P09237 267 aaPredicted RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 VAMP1P23763 118 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 GABRR1P24046 479 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 OR52H1Q8NGJ2 320 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 CALHM2Q9HA72 323 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 MYOZ1Q9NP98 299 aaPredicted RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 PLEKHA6Q9Y2H5 1048 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 KCNAB3O43448 404 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 HTR3BO95264 441 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 EDN3P14138 238 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 MPZP25189 248 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 CD34P28906 385 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 ALDH3B1P43353 468 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 SRSF6Q13247 344 aaKnown RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 PABPC1L2AQ5JQF8 200 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 SIGIRRQ6IA17 410 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 BRICD5Q6PL45 260 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 TMUB2Q71RG4 321 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 OR5M8Q8NGP6 311 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 URM1Q9BTM9 101 aaKnown RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 C1QTNF6Q9BXI9 259 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 PECRQ9BY49 303 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 ARL6Q9H0F7 186 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 CRIM1Q9NZV1 1036 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 NOSIPQ9Y314 301 aaKnown RBP12.75□□□□□ -0.37
RFTN1-203ENST00000432519 LIPGQ9Y5X9 500 aa12.75□□□□□ -0.37
RFTN1-203ENST00000432519 MGAQ8IWI9 3026 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 TPD52L2O43399 206 aaKnown RBP12.74□□□□□ -0.37
RFTN1-203ENST00000432519 MTRF1O75570 445 aaKnown RBP12.74□□□□□ -0.37
RFTN1-203ENST00000432519 SCGNO76038 276 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 IFNA6P05013 189 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 TMEM225BP0DP42 221 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 NAT1P18440 290 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 IL13RA1P78552 427 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 SCRN3Q0VDG4 424 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 LYG2Q86SG7 212 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 HOGA1Q86XE5 327 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 FAM219AQ8IW50 185 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 C5orf66Q9H5L9 145 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 KCNN3Q9UGI6 736 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 TIMM10BQ9Y5J6 103 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 CSAG2Q9Y5P2 127 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 IGKV1-12A0A0C4DH73 117 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 ZNF205O95201 554 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 IGKV1D-12P01611 117 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 FAM3AP98173 230 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 PDCD1Q15116 288 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 MPPED2Q15777 294 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 RIPPLY2Q5TAB7 128 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 ALKAL2Q6UX46 152 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 DYRK2Q92630 601 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 TMEM230Q96A57 120 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 DMRTA2Q96SC8 542 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 OCSTAMPQ9BR26 566 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 UBQLN2Q9UHD9 624 aa12.74□□□□□ -0.37
RFTN1-203ENST00000432519 KMT2EQ8IZD2 1858 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 POM121CA8CG34 1229 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 MRPL33O75394 65 aaKnown RBP12.73□□□□□ -0.37
RFTN1-203ENST00000432519 HLA-HP01893 362 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 UBBP0CG47 229 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 S100A11P31949 105 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 ARF1P84077 181 aaKnown RBP12.73□□□□□ -0.37
RFTN1-203ENST00000432519 TAF9Q16594 264 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 NKAPLQ5M9Q1 402 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 KCTD9Q7L273 389 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 IL22RA1Q8N6P7 574 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 OR13G1Q8NGZ3 307 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 TERB2Q8NHR7 220 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 TMEM9BQ9NQ34 198 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 LINC00862A6NCI5 91 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 HMSDA8MTL9 139 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms