RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 CADM1Q9BY67 442 aaKnown RBP7.57□□□□□ -1.2
HDAC9-211ENST00000430454 PBOV1Q9GZY1 135 aa7.57□□□□□ -1.2
HDAC9-211ENST00000430454 DPAGT1Q9H3H5 408 aa7.57□□□□□ -1.2
HDAC9-211ENST00000430454 PRDM13Q9H4Q3 707 aa7.57□□□□□ -1.2
HDAC9-211ENST00000430454 BEX1Q9HBH7 125 aa7.57□□□□□ -1.2
HDAC9-211ENST00000430454 ACOXLQ9NUZ1 547 aa7.57□□□□□ -1.2
HDAC9-211ENST00000430454 ONECUT1Q9UBC0 465 aa7.57□□□□□ -1.2
HDAC9-211ENST00000430454 WARS2Q9UGM6 360 aaKnown RBP7.57□□□□□ -1.2
HDAC9-211ENST00000430454 POLDIP2Q9Y2S7 368 aa7.57□□□□□ -1.2
HDAC9-211ENST00000430454 SNX5Q9Y5X3 404 aa7.57□□□□□ -1.2
HDAC9-211ENST00000430454 hCG_1809904A0A1W2PP81 198 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 A0A1W2PPE2 198 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 A0A1W2PR64 198 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 A0A1W2PRV1 198 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 C5orf63A6NC05 138 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 SNTNA6NMZ2 147 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 LOC110117498-PIK3R3F6TDL0 507 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 HOXA3O43365 443 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-211ENST00000430454 KRT8P05787 483 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 MRPL3P09001 348 aaKnown RBP7.56□□□□□ -1.2
HDAC9-211ENST00000430454 GLRA1P23415 457 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 GPM6AP51674 278 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 ARF6P62330 175 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 CSNK2BP67870 215 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 IKZF1Q13422 519 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 DEFB112Q30KQ8 113 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 SMIM21Q3B7S5 101 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 FAM76BQ5HYJ3 339 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 WDR38Q5JTN6 314 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 SLX4IPQ5VYV7 408 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 PLCXD3Q63HM9 321 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 ZNF322Q6U7Q0 402 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-211ENST00000430454 BRD3OSQ6XYD6 125 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 Q6YL49 198 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 C1orf122Q6ZSJ8 110 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 C11orf53Q8IXP5 236 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 SLC35F2Q8IXU6 374 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 TCEANCQ8N8B7 351 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 BBS1Q8NFJ9 593 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 H1FXQ92522 213 aaKnown RBP7.56□□□□□ -1.2
HDAC9-211ENST00000430454 RPL3LQ92901 407 aaKnown RBP7.56□□□□□ -1.2
HDAC9-211ENST00000430454 LHX4Q969G2 390 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 RAB3IPQ96QF0 476 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-211ENST00000430454 GABARAPL1Q9H0R8 117 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 GPR84Q9NQS5 396 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 CLN6Q9NWW5 311 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 FAM53CQ9NYF3 392 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 NLKQ9UBE8 527 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 CTSZQ9UBR2 303 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 NUFIP1Q9UHK0 495 aaKnown RBP7.56□□□□□ -1.2
HDAC9-211ENST00000430454 GTF2A1LQ9UNN4 478 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 PIGLQ9Y2B2 252 aa7.56□□□□□ -1.2
HDAC9-211ENST00000430454 TRBV23-1A0A0A0MS06 115 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 CENPVL3A0A0U1RRI6 287 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 A0A1W2PQ09 198 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 OR2AT4A6NND4 320 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 DHRS7CA6NNS2 312 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 ZNF732B4DXR9 585 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 SLC1A7O00341 560 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 SPRY1O43609 319 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-211ENST00000430454 DHRS3O75911 302 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 PAHP00439 452 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 SERPINA3P01011 423 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 NRASP01111 189 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 FBP1P09467 338 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 NDUFB7P17568 137 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 EGR1P18146 543 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 RBMXP38159 391 aaKnown RBP7.55□□□□□ -1.2
HDAC9-211ENST00000430454 GABRA2P47869 451 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 TGM4P49221 684 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 DAPP51397 102 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 CAPZA1P52907 286 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 CDC42P60953 191 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 CLVS2Q5SYC1 327 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 STUMQ69YW2 141 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 C17orf107Q6ZR85 190 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 MOB3CQ70IA8 216 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 KRT74Q7RTS7 529 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 FAM220AQ7Z4H9 259 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 WDR86Q86TI4 376 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 DTX3Q8N9I9 347 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 OR5D13Q8NGL4 314 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 OR8J1Q8NGP2 316 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 OR51E1Q8TCB6 317 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 DYRK2Q92630 601 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 MRPL48Q96GC5 212 aaKnown RBP7.55□□□□□ -1.2
HDAC9-211ENST00000430454 CENPNQ96H22 339 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-211ENST00000430454 ZNF48Q96MX3 618 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-211ENST00000430454 DUX5Q96PT3 197 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 TBX15Q96SF7 602 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 SIRPDQ9H106 197 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 SLITRK2Q9H156 845 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 RASSF4Q9H2L5 321 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 PLEKHA1Q9HB21 404 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 SMURF1Q9HCE7 757 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 FAM206AQ9NX38 181 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 ZNF319Q9P2F9 582 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 SLC25A10Q9UBX3 287 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-211ENST00000430454 SLC7A11Q9UPY5 501 aa7.55□□□□□ -1.2
HDAC9-211ENST00000430454 KLHDC2Q9Y2U9 406 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms