RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 IGHV1OR21-1A0A087WYE8 117 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 COLCA2A8K830 154 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 LMO7DNF2Z398 122 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 FBXO24O75426 580 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 IFNA2P01563 188 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 APOC1P02654 83 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 HPNP05981 417 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 BLVRBP30043 206 aaPredicted RBP13.21□□□□□ -0.29
LINC00839-202ENST00000429940 RPL12P30050 165 aaKnown RBP13.21□□□□□ -0.29
LINC00839-202ENST00000429940 CFHR1Q03591 330 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 RBM39Q14498 530 aaKnown RBP13.21□□□□□ -0.29
LINC00839-202ENST00000429940 KISS1Q15726 138 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 IAH1Q2TAA2 248 aaPredicted RBP13.21□□□□□ -0.29
LINC00839-202ENST00000429940 OGFOD3Q6PK18 319 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 SSC4DQ8WTU2 575 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 NPRL2Q8WTW4 380 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 PECRQ9BY49 303 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 CNTNAP3Q9BZ76 1288 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 PNRC2Q9NPJ4 139 aaKnown RBP13.21□□□□□ -0.29
LINC00839-202ENST00000429940 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00839-202ENST00000429940 SDHAF3Q9NRP4 125 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 C1orf123Q9NWV4 160 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 PPP4R1LQ9P1A2 415 aa13.21□□□□□ -0.29
LINC00839-202ENST00000429940 A0A1W2PR77 199 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 C9JQL5 133 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 K7EPK0 472 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 ZNF708P17019 499 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 PTGER4P35408 488 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 RBMXP38159 391 aaKnown RBP13.2□□□□□ -0.3
LINC00839-202ENST00000429940 F2RL1P55085 397 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 S100A12P80511 92 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 SURF2Q15527 256 aaPredicted RBP13.2□□□□□ -0.3
LINC00839-202ENST00000429940 AKIRIN2Q53H80 203 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 TMEM268Q5VZI3 342 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 SLC25A47Q6Q0C1 308 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 C1QL2Q7Z5L3 287 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 PLXDC1Q8IUK5 500 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 FAM71E2Q8N5Q1 922 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 OR14K1Q8NGZ2 314 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 PARP11Q9NR21 331 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 FOXI3A8MTJ6 420 aaPredicted RBP13.2□□□□□ -0.3
LINC00839-202ENST00000429940 HOXB1P14653 301 aaPredicted RBP13.2□□□□□ -0.3
LINC00839-202ENST00000429940 SERPINA2P20848 420 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 CD27P26842 260 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 PTGFRP43088 359 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 ID4P47928 161 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 CSNK1EP49674 416 aaKnown RBP13.2□□□□□ -0.3
LINC00839-202ENST00000429940 PLPPR5Q32ZL2 321 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 NSUN5P2Q63ZY6 315 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 DHRS11Q6UWP2 260 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 Q6ZRG5 221 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 KIRREL1Q96J84 757 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 MRGPRX4Q96LA9 322 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 CRB3Q9BUF7 120 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 ZNF701Q9NV72 531 aaPredicted RBP13.2□□□□□ -0.3
LINC00839-202ENST00000429940 FBXL17Q9UF56 701 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 SEC16AO15027 2179 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 CABIN1Q9Y6J0 2220 aa13.2□□□□□ -0.3
LINC00839-202ENST00000429940 A0A1W2PNR3 127 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 METTL12A8MUP2 240 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 TRAF3IP2O43734 574 aaPredicted RBP13.19□□□□□ -0.3
LINC00839-202ENST00000429940 DVL1P1P54792 670 aaPredicted RBP13.19□□□□□ -0.3
LINC00839-202ENST00000429940 RAB5BP61020 215 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 ACY1Q03154 408 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 SPEM2Q0P670 501 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 SMCO1Q147U7 214 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 SWI5Q1ZZU3 235 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 POC1BQ8TC44 478 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 STT3BQ8TCJ2 826 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 LIN37Q96GY3 246 aaPredicted RBP13.19□□□□□ -0.3
LINC00839-202ENST00000429940 AKR1E2Q96JD6 320 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 OR5B2Q96R09 309 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 FGF21Q9NSA1 209 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 GHRLQ9UBU3 117 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 POMT1Q9Y6A1 747 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 CFAP54Q96N23 3096 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 FER1L5A0AVI2 2057 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 FAM157AC9JC47 383 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 PRSS44E7EML9 344 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 E9PLN8 166 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 STMND1H3BQB6 276 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 ETV2O00321 342 aaPredicted RBP13.19□□□□□ -0.3
LINC00839-202ENST00000429940 DUX1O43812 170 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 JTBO76095 146 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 QDPRP09417 244 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 OR8U9P0C7N5 309 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 FOLR2P14207 255 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 FCGR2CP31995 323 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC00839-202ENST00000429940 GRB2P62993 217 aaKnown RBP13.19□□□□□ -0.3
LINC00839-202ENST00000429940 ECH1Q13011 328 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 ANKRD37Q7Z713 158 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 CARFQ8N187 725 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 OR8U1Q8NH10 309 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 LILRB1Q8NHL6 650 aaPredicted RBP13.19□□□□□ -0.3
LINC00839-202ENST00000429940 FNDC9Q8TBE3 224 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 C14orf79Q96F83 325 aa13.19□□□□□ -0.3
LINC00839-202ENST00000429940 PGAM5Q96HS1 289 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms