RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 ZNF709Q8N972 641 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR51F2Q8NH61 342 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 DGAT2Q96PD7 388 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 CMKLR1Q99788 373 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 ZFYVE21Q9BQ24 234 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 HAO2Q9NYQ3 351 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 WSB2Q9NYS7 404 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 IFITM10A6NMD0 228 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 SCDO00767 359 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 CSTAP01040 98 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 SERPINA7P05543 415 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 S100GP29377 79 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 NUP54Q7Z3B4 507 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 GRINAQ7Z429 371 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 LIN37Q96GY3 246 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 PGAM5Q96HS1 289 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 AP1S3Q96PC3 154 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 SLC17A4Q9Y2C5 497 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 TRAV27A0A087WT01 109 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 CCDC187A0A096LP49 1063 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 OGG1O15527 345 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 TOX4O94842 621 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 CEACAM8P31997 349 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 SSBP1Q04837 148 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 FZD5Q13467 585 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 DUSP5Q16690 384 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 DMKNQ6E0U4 476 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 ZNF793Q6ZN11 406 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 DPY19L2P2Q6ZN68 376 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 TMEM182Q6ZP80 229 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 SDSLQ96GA7 329 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 MACROD1Q9BQ69 325 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 FCGR3AP08637 254 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 BCKDHBP21953 392 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 RAB11AP62491 216 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 DEFB133Q30KQ1 61 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 HIST1H2AAQ96QV6 131 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 GPA33Q99795 319 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 BET1LQ9NYM9 111 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 EFSO43281 561 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 AMBPP02760 352 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 PNMTP11086 282 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 FGF5P12034 268 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 FUT1P19526 365 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 TMEM229BQ8NBD8 167 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 NECAP1Q8NC96 275 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 MUCL1Q96DR8 90 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 HDGFL3Q9Y3E1 203 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 TRAV34A0A0B4J273 112 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 F8VVB4 439 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 F8VWA3 439 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 OR4A8P0C604 315 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 DNASE1L1P49184 302 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 CEBPEQ15744 281 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 Q499Y3 187 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 NUFIP2Q7Z417 695 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 NT5CQ8TCD5 201 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 SEH1LQ96EE3 360 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 TNFRSF13CQ96RJ3 184 aa12.89□□□□□ -0.35
SYNGAP1-203ENST00000428982 LTBP2Q14767 1821 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 A0A087WUJ7 227 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 A0A1W2PN81 502 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 A0A1W2PQF6 199 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 MED19A0JLT2 244 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 BLACEA4D250 179 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 CDC14BO60729 498 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 CHRNA7P36544 502 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 DUSP3P51452 185 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 CLDN6P56747 220 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 CHRFAM7AQ494W8 412 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 ZNF101Q8IZC7 436 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 PCED1AQ9H1Q7 454 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 CHST11Q9NPF2 352 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 WSB1Q9Y6I7 421 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 A0A1B0GWA3 101 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 C9JQL5 133 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 UBE2G2P60604 165 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 SUMO1P63165 101 aaKnown RBP12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 BTNL8Q6UX41 500 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 STAC2Q6ZMT1 411 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 EXD3Q8N9H8 876 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 OR4S1Q8NGB4 309 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 OR2D3Q8NGH3 330 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 FNDC9Q8TBE3 224 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 KCNE3Q9Y6H6 103 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 ITGB2P05107 769 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 HKR1P10072 659 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 DPP4P27487 766 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 ERVFRD-1P60508 538 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 GAB4Q2WGN9 574 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 OR8B4Q96RC9 309 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 TBC1D29Q9UFV1 150 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 VAX2Q9UIW0 290 aa12.88□□□□□ -0.35
SYNGAP1-203ENST00000428982 SELEP16581 610 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 SLC17A1Q14916 467 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 CSNK1A1LQ8N752 337 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 NMES1Q9C002 83 aa12.87□□□□□ -0.35
SYNGAP1-203ENST00000428982 CLDN16Q9Y5I7 305 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms