RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PRODHO43272 600 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 CLPXO76031 633 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 OSMP13725 252 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 PAICSP22234 425 aaKnown RBP12.71□□□□□ -0.37
SEC13-210ENST00000428626 GPM6AP51674 278 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 RPL15P61313 204 aaKnown RBP12.71□□□□□ -0.37
SEC13-210ENST00000428626 GK3PQ14409 553 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 OCLNQ16625 522 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 LRRC10Q5BKY1 277 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 HCP5Q6MZN7 132 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 KRT74Q7RTS7 529 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.71□□□□□ -0.37
SEC13-210ENST00000428626 ZSCAN4Q8NAM6 433 aaPredicted RBP12.71□□□□□ -0.37
SEC13-210ENST00000428626 C17orf50Q8WW18 174 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 H1FXQ92522 213 aaKnown RBP12.71□□□□□ -0.37
SEC13-210ENST00000428626 PPP1R14AQ96A00 147 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 LRGUKQ96M69 825 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 THTPAQ9BU02 230 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 FAM206AQ9NX38 181 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 ZNF222Q9UK12 451 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 MAB21L2Q9Y586 359 aa12.71□□□□□ -0.37
SEC13-210ENST00000428626 TMEM210A6NLX4 147 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 NPFFO15130 113 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 ACAA1P09110 424 aaPredicted RBP12.7□□□□□ -0.38
SEC13-210ENST00000428626 CEP78Q5JTW2 689 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 KCTD8Q6ZWB6 473 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 TRPM8Q7Z2W7 1104 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 ZDHHC23Q8IYP9 409 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 AJUBAQ96IF1 538 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 DMRTB1Q96MA1 342 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 TTTY10Q9BZA0 68 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 DNTTIP1Q9H147 329 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 C1orf21Q9H246 121 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 OR51I2Q9H344 312 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 NLKQ9UBE8 527 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 SLC25A10Q9UBX3 287 aaPredicted RBP12.7□□□□□ -0.38
SEC13-210ENST00000428626 COPS3Q9UNS2 423 aa12.7□□□□□ -0.38
SEC13-210ENST00000428626 AQP12BA6NM10 295 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 OR2AT4A6NND4 320 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 GPR37O15354 613 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 FAM107AO95990 144 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 IGLV3-1P01715 115 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 HMGN1P05114 100 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 MRPL3P09001 348 aaKnown RBP12.69□□□□□ -0.38
SEC13-210ENST00000428626 SAA4P35542 130 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 APOFQ13790 326 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 SLC35D3Q5M8T2 416 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 AQP12AQ8IXF9 295 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 FTMTQ8N4E7 242 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 CCDC197Q8NCU1 140 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 ZNRF1Q8ND25 227 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 RBM4BQ9BQ04 359 aaKnown RBP12.69□□□□□ -0.38
SEC13-210ENST00000428626 DPAGT1Q9H3H5 408 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 NIPAL2Q9H841 368 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 SLC25A19Q9HC21 320 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 VPREB3Q9UKI3 123 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 FAM96BQ9Y3D0 163 aa12.69□□□□□ -0.38
SEC13-210ENST00000428626 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 NKX6-3A6NJ46 265 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 ZNF732B4DXR9 585 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 GNGT2O14610 69 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 TSPAN15O95858 294 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 FBP1P09467 338 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 PSG2P11465 335 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 NDUFB7P17568 137 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 GLRA1P23415 457 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 PAX6P26367 422 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 CAV3P56539 151 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 RPS7P62081 194 aaKnown RBP12.68□□□□□ -0.38
SEC13-210ENST00000428626 MFGE8Q08431 387 aaPredicted RBP12.68□□□□□ -0.38
SEC13-210ENST00000428626 SNCBQ16143 134 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 BCDIN3DQ7Z5W3 292 aaKnown RBP12.68□□□□□ -0.38
SEC13-210ENST00000428626 KRT77Q7Z794 578 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 CMTM4Q8IZR5 234 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 NPRL2Q8WTW4 380 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 AQP3Q92482 292 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 DUS3LQ96G46 650 aaKnown RBP12.68□□□□□ -0.38
SEC13-210ENST00000428626 TEAD3Q99594 435 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 C16orf95Q9H693 158 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 ABCB9Q9NP78 766 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 LAMP5Q9UJQ1 280 aa12.68□□□□□ -0.38
SEC13-210ENST00000428626 A0A0U1RQV5 110 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 TMEM269A0A1B0GVZ9 245 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 MEIOCA2RUB1 952 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 MEGF11A6BM72 1044 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 M0R129 80 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 MAGEB4O15481 346 aaPredicted RBP12.67□□□□□ -0.38
SEC13-210ENST00000428626 FKBP6O75344 327 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 E2F6O75461 281 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 TSPAN9O75954 239 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 FAHP16930 419 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 GABRA2P47869 451 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 GNG3P63215 75 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 CBX1P83916 185 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 GUCA2AQ02747 115 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 CEACAM21Q3KPI0 293 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 HIST2H2BDQ6DRA6 164 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 GDPGP1Q6ZNW5 385 aa12.67□□□□□ -0.38
SEC13-210ENST00000428626 C1orf122Q6ZSJ8 110 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms