RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 RNF122Q9H9V4 155 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 DKKL1Q9UK85 242 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 PCNX1Q96RV3 2341 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 PLXND1Q9Y4D7 1925 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 GALR2O43603 387 aaPredicted RBP14.2□□□□□ -0.14
PKP4-205ENST00000426248 IGKV1D-16P01601 117 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 SLC25A4P12235 298 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 C2orf76Q3KRA6 126 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 HSD17B11Q8NBQ5 300 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 CMTM3Q96MX0 182 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 P04436 131 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 HIST1H1CP16403 213 aaKnown RBP14.19□□□□□ -0.14
PKP4-205ENST00000426248 PNLDC1Q8NA58 520 aaKnown RBP14.19□□□□□ -0.14
PKP4-205ENST00000426248 OR9K2Q8NGE7 335 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 CGGBP1Q9UFW8 167 aaPredicted RBP14.19□□□□□ -0.14
PKP4-205ENST00000426248 PCDH15Q96QU1 1955 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 TGOLN2O43493 480 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 KNG1P01042 644 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 IGHV2-5P01817 119 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 TRGC2P03986 189 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 CRHP06850 196 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 CTXN1P60606 82 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 ISXQ2M1V0 245 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 MRPL41Q8IXM3 137 aaKnown RBP14.19□□□□□ -0.14
PKP4-205ENST00000426248 FAM213BQ8TBF2 198 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 ZNF775Q96BV0 537 aaPredicted RBP14.19□□□□□ -0.14
PKP4-205ENST00000426248 TAAR9Q96RI9 348 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 MRPL37Q9BZE1 423 aaKnown RBP14.19□□□□□ -0.14
PKP4-205ENST00000426248 FLRT3Q9NZU0 649 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 GRHPRQ9UBQ7 328 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 ZNF346Q9UL40 294 aaKnown RBP14.19□□□□□ -0.14
PKP4-205ENST00000426248 CCDC187A0A096LP49 1063 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 FRG2CA6NGY1 282 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 MSGN1A6NI15 193 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 VSTM2BA6NLU5 285 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 EPPINO95925 133 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 ALDH3B1P43353 468 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 DNASE1L1P49184 302 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 PLGLB1Q02325 96 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 MGAT2Q10469 447 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 TOMM34Q15785 309 aaPredicted RBP14.19□□□□□ -0.14
PKP4-205ENST00000426248 CSRP2Q16527 193 aa14.19□□□□□ -0.14
PKP4-205ENST00000426248 SCGB1D1O95968 90 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 RAB4AP20338 218 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 SLC26A5P58743 744 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 FOXO1Q12778 655 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 THNSL2Q86YJ6 484 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 RNF113BQ8IZP6 322 aaKnown RBP14.18□□□□□ -0.14
PKP4-205ENST00000426248 ASB13Q8WXK3 278 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 OR14J1Q9UGF5 321 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 ZNF705FA8MVS1 300 aaPredicted RBP14.18□□□□□ -0.14
PKP4-205ENST00000426248 ZNF705DP0CH99 300 aaPredicted RBP14.18□□□□□ -0.14
PKP4-205ENST00000426248 ZNF705BP0CI00 300 aaPredicted RBP14.18□□□□□ -0.14
PKP4-205ENST00000426248 PET100P0DJ07 73 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 GABRA4P48169 554 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 OPN5Q6U736 354 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 TSSK2Q96PF2 358 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 PRDM13Q9H4Q3 707 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 K7EPK0 472 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 GPANK1O95872 356 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 WNT11O96014 354 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 CD79AP11912 226 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 CD226Q15762 336 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 C9orf40Q8IXQ3 194 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 FAM71E2Q8N5Q1 922 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 ZNF417Q8TAU3 575 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 FGF11Q92914 225 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 CTHRC1Q96CG8 243 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 DDA1Q9BW61 102 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 CBLN4Q9NTU7 201 aa14.18□□□□□ -0.14
PKP4-205ENST00000426248 TRAV8-7A0A075B6U6 113 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 C9orf170A2RU37 121 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 GEMIN2O14893 280 aaKnown RBP14.17□□□□□ -0.14
PKP4-205ENST00000426248 FGF16O43320 207 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 IL33O95760 270 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 CD37P11049 281 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 PNMTP11086 282 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 SLC6A8P48029 635 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 NPY4RP50391 375 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 NUTF2P61970 127 aaKnown RBP14.17□□□□□ -0.14
PKP4-205ENST00000426248 LSM6P62312 80 aaKnown RBP14.17□□□□□ -0.14
PKP4-205ENST00000426248 TNFRSF9Q07011 255 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 LEG1Q6P5S2 330 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 TRAPPC6BQ86SZ2 158 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 PEG10Q86TG7 708 aaKnown RBP14.17□□□□□ -0.14
PKP4-205ENST00000426248 ARHGDIGQ99819 225 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 LMF2Q9BU23 707 aaKnown RBP14.17□□□□□ -0.14
PKP4-205ENST00000426248 MEMO1Q9Y316 297 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 NDUFB2O95178 105 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 CD14P08571 375 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 TMEM225Q6GV28 225 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 ZSCAN4Q8NAM6 433 aaPredicted RBP14.17□□□□□ -0.14
PKP4-205ENST00000426248 CLEC1AQ8NC01 280 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 MARCH1Q8TCQ1 289 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 GPR148Q8TDV2 347 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 PPP1R14DQ9NXH3 145 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 RBM7Q9Y580 266 aaKnown RBP14.17□□□□□ -0.14
PKP4-205ENST00000426248 KIF26BQ2KJY2 2108 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 CELA2AP08217 269 aa14.17□□□□□ -0.14
PKP4-205ENST00000426248 CCNOP22674 350 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms