RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 COPS3Q9UNS2 423 aa13.72□□□□□ -0.21
SHANK2-207ENST00000425049 SOX21Q9Y651 276 aaPredicted RBP13.72□□□□□ -0.21
SHANK2-207ENST00000425049 NBEAL1Q6ZS30 2694 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 OR5B21A6NL26 309 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 ZNF732B4DXR9 585 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-207ENST00000425049 HOXA3O43365 443 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-207ENST00000425049 AKR7A2O43488 359 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 GLRA1P23415 457 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 ARF6P62330 175 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 ZBTB37Q5TC79 503 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 C12orf73Q69YU5 71 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 STUMQ69YW2 141 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 KDM4DQ6B0I6 523 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 BCDIN3DQ7Z5W3 292 aaKnown RBP13.71□□□□□ -0.21
SHANK2-207ENST00000425049 OR5T2Q8NGG2 359 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 LRTOMTQ8WZ04 291 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 H1FXQ92522 213 aaKnown RBP13.71□□□□□ -0.21
SHANK2-207ENST00000425049 LHX4Q969G2 390 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 SEH1LQ96EE3 360 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 RAB3IPQ96QF0 476 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-207ENST00000425049 TBX15Q96SF7 602 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 DNTTIP1Q9H147 329 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 RIBC2Q9H4K1 309 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 CNTD2Q9H8S5 307 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 ADGRL4Q9HBW9 690 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 NOX4Q9NPH5 578 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 CLN6Q9NWW5 311 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 PIGLQ9Y2B2 252 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 KPTNQ9Y664 436 aa13.71□□□□□ -0.21
SHANK2-207ENST00000425049 TENM1Q9UKZ4 2725 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 IGHV1-69DA0A0B4J2H0 117 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 A0A1B0GVI7 797 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 A0A1B0GW55 424 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DHRS3O75911 302 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 IGHV1-69P01742 117 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 CRYBA1P05813 215 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DUX4L2P0CJ85 424 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DUX4L3P0CJ86 424 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DUX4L4P0CJ87 422 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DUX4L5P0CJ88 424 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DUX4L6P0CJ89 424 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DUX4L7P0CJ90 424 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 MMP9P14780 707 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 FAHP16930 419 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 EPHA2P29317 976 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 IL13RA1P78552 427 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 EGR3Q06889 387 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 MFGE8Q08431 387 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-207ENST00000425049 CEACAM21Q3KPI0 293 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 CDONQ4KMG0 1287 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 ZNF684Q5T5D7 378 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 AADACL4Q5VUY2 407 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DUX4L9Q6RFH8 374 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-207ENST00000425049 MOB3CQ70IA8 216 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 OR51G2Q8NGK0 314 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 SGMS2Q8NHU3 365 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 ZNF671Q8TAW3 534 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 TMIGD2Q96BF3 282 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DUS3LQ96G46 650 aaKnown RBP13.7□□□□□ -0.22
SHANK2-207ENST00000425049 CENPNQ96H22 339 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-207ENST00000425049 MED30Q96HR3 178 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 CIB1Q99828 191 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 SIRPDQ9H106 197 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 WDR13Q9H1Z4 485 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 SEMA6AQ9H2E6 1030 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 TNFRSF19Q9NS68 423 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 ACOXLQ9NUZ1 547 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 NLKQ9UBE8 527 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 DUX4Q9UBX2 424 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 WARS2Q9UGM6 360 aaKnown RBP13.7□□□□□ -0.22
SHANK2-207ENST00000425049 PCDHGB1Q9Y5G3 927 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 R4GMQ9 66 aa13.7□□□□□ -0.22
SHANK2-207ENST00000425049 CENPVL3A0A0U1RRI6 287 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 PRR32B1ATL7 298 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 KRT8P05787 483 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 ATP6V1E1P36543 226 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 GABRA2P47869 451 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 ELF3P78545 371 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-207ENST00000425049 FAM76BQ5HYJ3 339 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 ATPAF1Q5TC12 328 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-207ENST00000425049 C16orf87Q6PH81 154 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 OR5A2Q8NGI9 324 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 SLC25A10Q9UBX3 287 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-207ENST00000425049 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.69□□□□□ -0.22
SHANK2-207ENST00000425049 OAZ3Q9UMX2 235 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 SNX5Q9Y5X3 404 aa13.69□□□□□ -0.22
SHANK2-207ENST00000425049 A0A1W2PQ09 198 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 OR2AT4A6NND4 320 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 NRASP01111 189 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 TTRP02766 147 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 NDUFB7P17568 137 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 TGM4P49221 684 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 HAGHLQ6PII5 290 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-207ENST00000425049 SHISA2Q6UWI4 295 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 VMO1Q7Z5L0 202 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 PDZD9Q8IXQ8 264 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 FGFRL1Q8N441 504 aa13.68□□□□□ -0.22
SHANK2-207ENST00000425049 TMEM86BQ8N661 226 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms