RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 FAHP16930 419 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 GPM6AP51674 278 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 ACTA2P62736 377 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 ACTG2P63267 376 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 GABPB1Q06547 395 aaPredicted RBP9.14□□□□□ -0.95
USP49-204ENST00000423567 LRRC36Q1X8D7 754 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 ODF4Q2M2E3 257 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 CEACAM21Q3KPI0 293 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 TP53I3Q53FA7 332 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 CEP78Q5JTW2 689 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 CLVS2Q5SYC1 327 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 ZNF684Q5T5D7 378 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 CD276Q5ZPR3 534 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 WDR82Q6UXN9 313 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 C1QL2Q7Z5L3 287 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 WDR86Q86TI4 376 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 CATSPERDQ86XM0 798 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 C11orf53Q8IXP5 236 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 ACBD7Q8N6N7 88 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 PACRGLQ8N7B6 248 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 SCCPDHQ8NBX0 429 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 OR5A2Q8NGI9 324 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 RHOXF1Q8NHV9 184 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 TMEM158Q8WZ71 300 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 RPL3LQ92901 407 aaKnown RBP9.14□□□□□ -0.95
USP49-204ENST00000423567 TECTBQ96PL2 329 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 TMPRSS13Q9BYE2 586 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 TLNRD1Q9H1K6 362 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 PPP1R3EQ9H7J1 279 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 MMP26Q9NRE1 261 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 ACOXLQ9NUZ1 547 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 DNAJB11Q9UBS4 358 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 SLC22A13Q9Y226 551 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 RPL36Q9Y3U8 105 aaKnown RBP9.14□□□□□ -0.95
USP49-204ENST00000423567 INSIG2Q9Y5U4 225 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 AUP1Q9Y679 476 aa9.14□□□□□ -0.95
USP49-204ENST00000423567 IGHV3OR15-7A0A075B7D8 119 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 RNF212BA8MTL3 300 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 TRAPPC2LH3BP13 241 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 DLGAP1O14490 977 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 TCF21O43680 179 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 GYPAP02724 150 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 UBCP0CG48 685 aaKnown RBP9.13□□□□□ -0.95
USP49-204ENST00000423567 DBTP11182 482 aaKnown RBP9.13□□□□□ -0.95
USP49-204ENST00000423567 ZNF12P17014 697 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 EGR1P18146 543 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 GABRB1P18505 474 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 ADRA2CP18825 462 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 CFHR2P36980 270 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 PSMB10P40306 273 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 ZNF85Q03923 595 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 ZNF91Q05481 1191 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 RAB40BQ12829 278 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 ARMCX4Q5H9R4 360 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 FAM76BQ5HYJ3 339 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 TEX36Q5VZQ5 186 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 TTC23Q5W5X9 447 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 WDR25Q64LD2 544 aaPredicted RBP9.13□□□□□ -0.95
USP49-204ENST00000423567 LYPD2Q6UXB3 125 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 KRT74Q7RTS7 529 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 SLC36A1Q7Z2H8 476 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 SETD9Q8NE22 299 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 ZNF671Q8TAW3 534 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 ZNF418Q8TF45 676 aaPredicted RBP9.13□□□□□ -0.95
USP49-204ENST00000423567 CYGBQ8WWM9 190 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 HPSE2Q8WWQ2 592 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 RAB40AQ8WXH6 277 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 RORBQ92753 470 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 C12orf43Q96C57 262 aaKnown RBP9.13□□□□□ -0.95
USP49-204ENST00000423567 LGALS12Q96DT0 336 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 VCXQ9H320 206 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 AASSQ9UDR5 926 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 EXOGQ9Y2C4 368 aaKnown RBP9.13□□□□□ -0.95
USP49-204ENST00000423567 V9GYS6 101 aa9.13□□□□□ -0.95
USP49-204ENST00000423567 IGHV2-70DA0A0C4DH43 119 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 A0A1B0GTI1 187 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 NKX6-3A6NJ46 265 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 SRRM5B3KS81 715 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 ANKRD65E5RJM6 399 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 J3QLW9 94 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 TMPRSS2O15393 492 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 ENSAO43768 121 aaKnown RBP9.12□□□□□ -0.95
USP49-204ENST00000423567 GATBO75879 557 aaKnown RBP9.12□□□□□ -0.95
USP49-204ENST00000423567 SERPINA3P01011 423 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 HTR1AP08908 422 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 ZNF19P17023 458 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 EPHA1P21709 976 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 CCL1P22362 96 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
USP49-204ENST00000423567 FPR2P25090 351 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 PEX2P28328 305 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 GMFBP60983 142 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 HOXA4Q00056 320 aaPredicted RBP9.12□□□□□ -0.95
USP49-204ENST00000423567 CDONQ4KMG0 1287 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 KLHL22Q53GT1 634 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 WDR38Q5JTN6 314 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 TMEM244Q5VVB8 128 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 LPCAT4Q643R3 524 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 FAM90A1Q86YD7 464 aa9.12□□□□□ -0.95
USP49-204ENST00000423567 ZNF573Q86YE8 665 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms