RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ZNF837Q96EG3 531 aaPredicted RBP13.85□□□□□ -0.19
CDH1-202ENST00000422392 SLC26A1Q9H2B4 701 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 ZNF629Q9UEG4 869 aaPredicted RBP13.85□□□□□ -0.19
CDH1-202ENST00000422392 MCTS1Q9ULC4 181 aaKnown RBP13.85□□□□□ -0.19
CDH1-202ENST00000422392 PIGLQ9Y2B2 252 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 CHCHD2Q9Y6H1 151 aaPredicted RBP13.85□□□□□ -0.19
CDH1-202ENST00000422392 SHANK1Q9Y566 2161 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 KIAA1549Q9HCM3 1950 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 MASP2O00187 686 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 PTGER4P35408 488 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 GRB2P62993 217 aaKnown RBP13.85□□□□□ -0.19
CDH1-202ENST00000422392 SCRN3Q0VDG4 424 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 ECH1Q13011 328 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 RSPO1Q2MKA7 263 aaPredicted RBP13.85□□□□□ -0.19
CDH1-202ENST00000422392 CHRFAM7AQ494W8 412 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 H3F3CQ6NXT2 135 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 RBM24Q9BX46 236 aaKnown RBP13.85□□□□□ -0.19
CDH1-202ENST00000422392 IGHV5-10-1A0A0J9YXX1 117 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 DHRS7CA6NNS2 312 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 RPL7L1Q6DKI1 246 aaKnown RBP13.84□□□□□ -0.19
CDH1-202ENST00000422392 OR2A2Q6IF42 318 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 HAGHLQ6PII5 290 aaPredicted RBP13.84□□□□□ -0.19
CDH1-202ENST00000422392 Q7L0L9 218 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 NAXEQ8NCW5 288 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 DNASE2BQ8WZ79 361 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 JSRP1Q96MG2 331 aaPredicted RBP13.84□□□□□ -0.19
CDH1-202ENST00000422392 PCED1AQ9H1Q7 454 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 OCIAD1Q9NX40 245 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 PCP4L1A6NKN8 68 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 FOXI3A8MTJ6 420 aaPredicted RBP13.84□□□□□ -0.19
CDH1-202ENST00000422392 SIGLEC6O43699 453 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 PNLIPP16233 465 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 GUCA1AP43080 201 aaPredicted RBP13.84□□□□□ -0.19
CDH1-202ENST00000422392 NPBWR1P48145 328 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 CSNK1A1P48729 337 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 NAAAQ02083 359 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 ENDOGQ14249 297 aaKnown RBP13.84□□□□□ -0.19
CDH1-202ENST00000422392 KCNMB1Q16558 191 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 CCDC157Q569K6 752 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 C2orf50Q96LR7 162 aa13.84□□□□□ -0.19
CDH1-202ENST00000422392 TNRC18O15417 2968 aaPredicted RBP13.84□□□□□ -0.19
CDH1-202ENST00000422392 DKK1O94907 266 aa13.83□□□□□ -0.19
CDH1-202ENST00000422392 FARS2O95363 451 aaKnown RBP13.83□□□□□ -0.19
CDH1-202ENST00000422392 CSTBP04080 98 aaKnown RBP13.83□□□□□ -0.19
CDH1-202ENST00000422392 MSR1P21757 451 aa13.83□□□□□ -0.19
CDH1-202ENST00000422392 ID4P47928 161 aa13.83□□□□□ -0.19
CDH1-202ENST00000422392 SNAI3Q3KNW1 292 aa13.83□□□□□ -0.19
CDH1-202ENST00000422392 POC1AQ8NBT0 407 aa13.83□□□□□ -0.19
CDH1-202ENST00000422392 OR2AE1Q8NHA4 323 aa13.83□□□□□ -0.19
CDH1-202ENST00000422392 CCDC74BQ96LY2 380 aa13.83□□□□□ -0.19
CDH1-202ENST00000422392 SLC5A7Q9GZV3 580 aa13.83□□□□□ -0.19
CDH1-202ENST00000422392 NELFAQ9H3P2 528 aa13.83□□□□□ -0.19
CDH1-202ENST00000422392 AGPAT2O15120 278 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 ANGPTL7O43827 346 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 DHRS3O75911 302 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 SERPINA5P05154 406 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 NAT2P11245 290 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 PRF1P14222 555 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 SLC35A1P78382 337 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 CHAF1BQ13112 559 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 FADS6Q8N9I5 356 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 SEMA6DQ8NFY4 1073 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 CNTNAP3BQ96NU0 1288 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 AQP10Q96PS8 301 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 S100A13Q99584 98 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 ZNF2Q9BSG1 426 aaPredicted RBP13.83□□□□□ -0.2
CDH1-202ENST00000422392 GPR173Q9NS66 373 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 HDGFL3Q9Y3E1 203 aa13.83□□□□□ -0.2
CDH1-202ENST00000422392 MSTNO14793 375 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 TLX3O43711 291 aaPredicted RBP13.82□□□□□ -0.2
CDH1-202ENST00000422392 LRP3O75074 770 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 NME2P22392 152 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 RRADP55042 308 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 TAS2R46P59540 309 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 SPEM2Q0P670 501 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 RAET1LQ5VY80 246 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 CLEC9AQ6UXN8 241 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 GJC3Q8NFK1 279 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 NABP1Q96AH0 204 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 NECAB3Q96P71 396 aaPredicted RBP13.82□□□□□ -0.2
CDH1-202ENST00000422392 PLEK2Q9NYT0 353 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 LPAR3Q9UBY5 353 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 LY6G6EA0A0G2JKS1 128 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 SPRY1O43609 319 aaPredicted RBP13.82□□□□□ -0.2
CDH1-202ENST00000422392 FBXO24O75426 580 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 IGLV3-1P01715 115 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 CCL3P10147 92 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 LYL1P12980 280 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 PRKACAP17612 351 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 NFYBP25208 207 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 CBX5P45973 191 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 HFEQ30201 348 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 PPP1R3BQ86XI6 285 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 IQCF2Q8IXL9 164 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 SHDQ96IW2 340 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 SCGB3A2Q96PL1 93 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 SMIM3Q9BZL3 60 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 MMP26Q9NRE1 261 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 UQCC1Q9NVA1 299 aa13.82□□□□□ -0.2
CDH1-202ENST00000422392 PLEKHJ1Q9NW61 149 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms