RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 LHFPL5Q8TAF8 219 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 NUBPLQ8TB37 319 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 C11orf40Q8WZ69 217 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 ATOH1Q92858 354 aaPredicted RBP11.09□□□□□ -0.63
CLCN4-203ENST00000421085 MS4A4AQ96JQ5 239 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 NPAS1Q99742 590 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 MAP1LC3BQ9GZQ8 125 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 ZBTB25P24278 435 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 TMPRSS11FQ6ZWK6 438 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 RABEPKQ7Z6M1 372 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 MYPOPQ86VE0 399 aaPredicted RBP11.09□□□□□ -0.63
CLCN4-203ENST00000421085 RPS19BP1Q86WX3 136 aaKnown RBP11.09□□□□□ -0.63
CLCN4-203ENST00000421085 STPG2Q8N412 459 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 A0A087WUJ7 227 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 ST6GAL1P15907 406 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 ARR3P36575 388 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 GPM6AP51674 278 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 FGF8P55075 233 aaPredicted RBP11.09□□□□□ -0.63
CLCN4-203ENST00000421085 FAM3AP98173 230 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 FAM78BQ5VT40 261 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 RSPO2Q6UXX9 243 aaPredicted RBP11.09□□□□□ -0.63
CLCN4-203ENST00000421085 CCDC74AQ96AQ1 378 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 MEGF10Q96KG7 1140 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 SEC11CQ9BY50 192 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 ZBP1Q9H171 429 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 RASL12Q9NYN1 266 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 ZNF25P17030 456 aaPredicted RBP11.09□□□□□ -0.63
CLCN4-203ENST00000421085 HTRA3P83110 453 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 FBXL6Q8N531 539 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 LINC01465Q8N7H1 131 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 RBFOX3A6NFN3 312 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 KLRC4-KLRK1H3BQV0 150 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 TNFRSF10CO14798 259 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 CRYBA1P05813 215 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 FUT6P51993 359 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 FZD2Q14332 565 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 PDCD1Q15116 288 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 NKAIN1Q4KMZ8 207 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 HMGCLL1Q8TB92 370 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 TIMM9Q9Y5J7 89 aa11.09□□□□□ -0.63
CLCN4-203ENST00000421085 NUP98P52948 1817 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 PHLPP1O60346 1717 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 CIDEAO60543 219 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 INHBBP09529 407 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 B4GALNT1Q00973 533 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 ROBO4Q8WZ75 1007 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 DYRK2Q92630 601 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 SLC2A9Q9NRM0 540 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 TMEM33P57088 247 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 NHLH1Q02575 133 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 NHLH2Q02577 135 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 ADPRHL1Q8NDY3 354 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 EXTL1Q92935 676 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 LSM2Q9Y333 95 aaKnown RBP11.08□□□□□ -0.64
CLCN4-203ENST00000421085 A0A1B0GTH9 108 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 TNFSF11O14788 317 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 TOX3O15405 576 aaPredicted RBP11.08□□□□□ -0.64
CLCN4-203ENST00000421085 KRASP01116 189 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 PGA3P0DJD8 388 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 C19orf57Q0VDD7 668 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 TRILQ7L0X0 811 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 TP53I13Q8NBR0 393 aaPredicted RBP11.08□□□□□ -0.64
CLCN4-203ENST00000421085 CLDN23Q96B33 292 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 MRPS24Q96EL2 167 aaKnown RBP11.08□□□□□ -0.64
CLCN4-203ENST00000421085 FAM157BP0CG42 384 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 PAX5Q02548 391 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 KIAA0040Q15053 153 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 ACSM6Q6P461 480 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 Q7L0L9 218 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 GALMQ96C23 342 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 LRFN3Q9BTN0 628 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 MIXL1Q9H2W2 232 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 A0A0B4J2E0 115 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 A0A1B0GX12 115 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 B4GALT1P15291 398 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 RFC3P40938 356 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 INSM1Q01101 510 aaPredicted RBP11.08□□□□□ -0.64
CLCN4-203ENST00000421085 Q3ZCU0 254 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 MRGPREQ86SM8 312 aa11.08□□□□□ -0.64
CLCN4-203ENST00000421085 FRG2CA6NGY1 282 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 AMTP48728 403 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 SLC25A1P53007 311 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 SLC38A11Q08AI6 406 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 B3GNTL1Q67FW5 361 aaPredicted RBP11.07□□□□□ -0.64
CLCN4-203ENST00000421085 FBXL14Q8N1E6 418 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 MORN4Q8NDC4 146 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 DEFB108BQ8NET1 73 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 NOXO1Q8NFA2 376 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 VN1R2Q8NFZ6 395 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 CCL4L1Q8NHW4 92 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 ACY3Q96HD9 319 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 GP1BAP07359 652 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 HMGA2P52926 109 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 ZNF77Q15935 545 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 ABI3BPQ7Z7G0 1075 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 OR2C3Q8N628 320 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 GVQW1Q8N7I0 195 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 SNX22Q96L94 193 aa11.07□□□□□ -0.64
CLCN4-203ENST00000421085 MRGPRX4Q96LA9 322 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms