RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 DHRS9Q9BPW9 319 aa13.17□□□□□ -0.3
AP000550.1-201ENST00000420508 ARRDC1-AS1Q9H2J1 176 aa13.17□□□□□ -0.3
AP000550.1-201ENST00000420508 CNTD2Q9H8S5 307 aa13.17□□□□□ -0.3
AP000550.1-201ENST00000420508 MPC1Q9Y5U8 109 aa13.17□□□□□ -0.3
AP000550.1-201ENST00000420508 C9orf170A2RU37 121 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 HSD17B6O14756 317 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 GMDSO60547 372 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 PDCD6O75340 191 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 H2AFB1P0C5Y9 115 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 CD96P40200 585 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 PSMB3P49720 205 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 H3F3CQ6NXT2 135 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 MUC20Q8N307 709 aaPredicted RBP13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 OR5AP2Q8NGF4 316 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 ATPIF1Q9UII2 106 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 KLF4O43474 513 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 CST4P01036 141 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 IL2RAP01589 272 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 HLA-HP01893 362 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 NOVA1P51513 510 aaKnown RBP13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 SMIM21Q3B7S5 101 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 TMEM268Q5VZI3 342 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 C19orf48Q6RUI8 117 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 H2BFWTQ7Z2G1 175 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 MAFAQ8NHW3 353 aaPredicted RBP13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 POMT1Q9Y6A1 747 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 ZNF732B4DXR9 585 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 HOXA1P49639 335 aaPredicted RBP13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 ASB5Q8WWX0 329 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 SPACA5Q96QH8 159 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 PLSCR3Q9NRY6 295 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 SF3B6Q9Y3B4 125 aaKnown RBP13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 TRGV5A0A0B4J1U4 118 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 SDCBPO00560 298 aaPredicted RBP13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 RER1O15258 196 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 CTSDP07339 412 aaPredicted RBP13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 SNCAP37840 140 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 HAAOP46952 286 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 KCNJ3P48549 501 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 SHEQ5VZ18 495 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 FDX2Q6P4F2 183 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 ROBO4Q8WZ75 1007 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 NMES1Q9C002 83 aa13.16□□□□□ -0.3
AP000550.1-201ENST00000420508 IGHV3-15A0A0B4J1V0 119 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 ACTL6AO96019 429 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 STARD6P59095 220 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 EXTL1Q92935 676 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 TMEM68Q96MH6 324 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 IGHV5-10-1A0A0J9YXX1 117 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 A0A1W2PPC1 479 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 IGHMP01871 453 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 BAXQ07812 192 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 CLINT1Q14677 625 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 HLXQ14774 488 aaPredicted RBP13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 PRSS54Q6PEW0 395 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 UNQ9370/PRO34162Q6UXP9 181 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 OR4S1Q8NGB4 309 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 HGDQ93099 445 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 NUDT16L1Q9BRJ7 211 aaKnown RBP13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 HRKO00198 91 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 OMGP23515 440 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 ZNF687Q8N1G0 1237 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 OR8B12Q8NGG6 310 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 ALKBH3Q96Q83 286 aaPredicted RBP13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 LANCL2Q9NS86 450 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 A0A1W2PNV4 684 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 CRYAAP02489 173 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 C1QCP02747 245 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 ISG15P05161 165 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 OR52N4Q8NGI2 321 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 OR10D3Q8NH80 312 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 ARHGAP5-AS1Q96IT6 56 aa13.15□□□□□ -0.3
AP000550.1-201ENST00000420508 OR2M5A3KFT3 312 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 HSPB6O14558 160 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 DTYMKP23919 212 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 MRPS34P82930 218 aaKnown RBP13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 IFITM3Q01628 133 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 GAB4Q2WGN9 574 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 WIPI1Q5MNZ9 446 aaPredicted RBP13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 HSD17B13Q7Z5P4 300 aaPredicted RBP13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 LINC00596Q86U02 117 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 OR4D6Q8NGJ1 314 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 PRRX2Q99811 253 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 C1orf87Q8N0U7 546 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 AKR7LQ8NHP1 331 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 TMED6Q8WW62 240 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 BORCS7Q96B45 105 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 GON4LQ3T8J9 2241 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 PIKFYVEQ9Y2I7 2098 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 MT-ND4LP03901 98 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 OR8U8P0C7N1 319 aa13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 ARF1P84077 181 aaKnown RBP13.14□□□□□ -0.31
AP000550.1-201ENST00000420508 MGAT2Q10469 447 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms