RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 KLHDC2Q9Y2U9 406 aa10.44□□□□□ -0.74
LINC00339-203ENST00000420503 NKX6-3A6NJ46 265 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 M0R1W7 72 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 GASTP01350 101 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 CCL3L1P16619 93 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 CALB2P22676 271 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 POU1F1P28069 291 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 FMO3P31513 532 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 DDOSTP39656 456 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 GABRA2P47869 451 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 MZT1Q08AG7 82 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 LDLRAD2Q5SZI1 272 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 ZNF770Q6IQ21 691 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-203ENST00000420503 KCTD8Q6ZWB6 473 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 TMEM219Q86XT9 240 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 BATF2Q8N1L9 274 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 C11orf42Q8N5U0 333 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 IQCF1Q8N6M8 205 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 TMEM185AQ8NFB2 350 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 OR6N2Q8NGY6 317 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 OR2T6Q8NHC8 308 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 OR5P3Q8WZ94 311 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 SGCDQ92629 289 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 CLPTM1LQ96KA5 538 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 ZNF488Q96MN9 340 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 CITED2Q99967 270 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-203ENST00000420503 TSSK6Q9BXA6 273 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 YY1AP1Q9H869 796 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 TBC1D23Q9NUY8 699 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 NLKQ9UBE8 527 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 CD300AQ9UGN4 299 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 COL7A1Q02388 2944 aa10.43□□□□□ -0.74
LINC00339-203ENST00000420503 OR2AT4A6NND4 320 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 H0YAE9 185 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 ARPC2O15144 300 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 FABP3P05413 133 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 ACAA1P09110 424 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-203ENST00000420503 VSIG8P0DPA2 414 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 PSG2P11465 335 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 IGLL1P15814 213 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 HSD11B1P28845 292 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 GNALP38405 381 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 OPRL1P41146 370 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 NAA10P41227 235 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-203ENST00000420503 GPM6AP51674 278 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 MNAT1P51948 309 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 ACSM1Q08AH1 577 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 FOXB2Q5VYV0 432 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 NCR3LG1Q68D85 454 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 ZNF782Q6ZMW2 699 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-203ENST00000420503 ERI1Q8IV48 349 aaKnown RBP10.42□□□□□ -0.74
LINC00339-203ENST00000420503 OR52L1Q8NGH7 329 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 OR4C15Q8NGM1 316 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-203ENST00000420503 RNF133Q8WVZ7 376 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 PIGCQ92535 297 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 R3HDM4Q96D70 268 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 PGAM5Q96HS1 289 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 RNF170Q96K19 258 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 MICU1Q9BPX6 476 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 RTL8AQ9BWD3 113 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 C1orf21Q9H246 121 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 OPA3Q9H6K4 179 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 NECAP2Q9NVZ3 263 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 NDE1Q9NXR1 346 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 LYVE1Q9Y5Y7 322 aa10.42□□□□□ -0.74
LINC00339-203ENST00000420503 A0A1W2PRX2 142 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 B2RBV5 119 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 K7EIL1 84 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 SELENOFO60613 162 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 FBXO24O75426 580 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 TIPRLO75663 272 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 MPIG6BO95866 241 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 HSD17B1P14061 328 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 SLC25A1P53007 311 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 CAV3P56539 151 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 SMIM11AP58511 58 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 GRB2P62993 217 aaKnown RBP10.41□□□□□ -0.74
LINC00339-203ENST00000420503 ZNF273Q14593 569 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 CEP78Q5JTW2 689 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 TEX30Q5JUR7 227 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 C16orf89Q6UX73 402 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 DEFB107AQ8IZN7 70 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 CD177Q8N6Q3 437 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 OR4M1Q8NGD0 313 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 OR10Z1Q8NGY1 313 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 CDRT15Q96T59 188 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 MEGF9Q9H1U4 602 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 OR10A2Q9H208 303 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 GORASP2Q9H8Y8 452 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 IL20Q9NYY1 176 aa10.41□□□□□ -0.74
LINC00339-203ENST00000420503 SF3B6Q9Y3B4 125 aaKnown RBP10.41□□□□□ -0.74
LINC00339-203ENST00000420503 ANXA2P2A6NMY6 339 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 GLRA1P23415 457 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 SPATS1Q496A3 300 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 RASSF6Q6ZTQ3 369 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 REC114Q7Z4M0 266 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 AQP11Q8NBQ7 271 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 OR8B12Q8NGG6 310 aa10.4□□□□□ -0.74
LINC00339-203ENST00000420503 INTS14Q96SY0 518 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms