RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ACOT7LQ6ZUV0 252 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 OR4D11Q8NGI4 311 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 SLC35E1Q96K37 410 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 SLC39A9Q9NUM3 307 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 MTFP1Q9UDX5 166 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 MAGEB4O15481 346 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-205ENST00000414879 PSMB6P28072 239 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 KIR2DS2P43631 304 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 SHEQ5VZ18 495 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 FBXW9Q5XUX1 488 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 PIK3IP1Q96FE7 263 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 C2orf50Q96LR7 162 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 RAB1BQ9H0U4 201 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 GPR35Q9HC97 309 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 TAAR3PQ9P1P4 343 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 CNTRLQ7Z7A1 2325 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 NKX2-5P52952 324 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-205ENST00000414879 SURF2Q15527 256 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-205ENST00000414879 MRM2Q9UI43 246 aaKnown RBP10.62□□□□□ -0.71
PTPRF-205ENST00000414879 TMEM210A6NLX4 147 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 FADS1O60427 444 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 CD3EP07766 207 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 IRF3Q14653 427 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 SVBPQ8N300 66 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 CELF2-AS1Q8N7Q2 184 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 SCARB1Q8WTV0 552 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 SEC22AQ96IW7 307 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 GCM1Q9NP62 436 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 TMEM38BQ9NVV0 291 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 STRAPQ9Y3F4 350 aaKnown RBP10.61□□□□□ -0.71
PTPRF-205ENST00000414879 CD3DP04234 171 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 OR4E1P0C645 316 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 ASAH2BP0C7U1 165 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 GNB3P16520 340 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 TAGLN2P37802 199 aaKnown RBP10.61□□□□□ -0.71
PTPRF-205ENST00000414879 MAGEA5P43359 124 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 ERHP84090 104 aaKnown RBP10.61□□□□□ -0.71
PTPRF-205ENST00000414879 BAXQ07812 192 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 ZNF529Q6P280 563 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 RHOUQ7L0Q8 258 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 NAA40Q86UY6 237 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 NUDCD2Q8WVJ2 157 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 PTX4Q96A99 478 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 SMIM3Q9BZL3 60 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 GAL3ST2Q9H3Q3 398 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 GP6Q9HCN6 339 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 TUBAL3A6NHL2 446 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 HRH1P35367 487 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 GPM6AP51674 278 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 SSX1Q16384 188 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 COMTD1Q86VU5 262 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 ZNF485Q8NCK3 441 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 S100PBPQ96BU1 408 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 MED30Q96HR3 178 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 FBXL2Q9UKC9 423 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 HRKO00198 91 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 ANXA7P20073 488 aaKnown RBP10.61□□□□□ -0.71
PTPRF-205ENST00000414879 TMPRSS3P57727 454 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 COL19A1Q14993 1142 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 HFEQ30201 348 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 SLC25A35Q3KQZ1 300 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 ZBTB37Q5TC79 503 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 FAM27BQ5VT28 67 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 C16orf47Q6ZP98 133 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-205ENST00000414879 GCNT2Q8N0V5 402 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 RTN4IP1Q8WWV3 396 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-205ENST00000414879 OR6C3Q9NZP0 311 aa10.61□□□□□ -0.71
PTPRF-205ENST00000414879 RAB19A4D1S5 217 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 ACSM4P0C7M7 580 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 CSF2RBP32927 897 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 ZFP36L2P47974 494 aaKnown RBP10.6□□□□□ -0.71
PTPRF-205ENST00000414879 RAB5CP51148 216 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 FAM74A1Q5RGS3 127 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 FHL5Q5TD97 284 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 FAHD2BQ6P2I3 314 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-205ENST00000414879 ZAR1Q86SH2 424 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 FAHD2AQ96GK7 314 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 ADTRPQ96IZ2 230 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 DIRC2Q96SL1 478 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 TTTY12Q9BZ98 90 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 PPP1R14DQ9NXH3 145 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 TET1Q8NFU7 2136 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 SSX5O60225 188 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 GABRB1P18505 474 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 ZBTB25P24278 435 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 RIPPLY2Q5TAB7 128 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 RAB1CQ92928 201 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 ADIPOR1Q96A54 375 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 A0A1W2PNV4 684 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 GSTZ1O43708 216 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-205ENST00000414879 SEMG1P04279 462 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 OMGP23515 440 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 S100A12P80511 92 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 MPV17LQ2QL34 196 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 TEX30Q5JUR7 227 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 ZNF770Q6IQ21 691 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-205ENST00000414879 KCNIP4Q6PIL6 250 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 Q6ZRG5 221 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 MFSD4AQ8N468 514 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 SLC26A10Q8NG04 563 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms