RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 DUX4Q9UBX2 424 aa4.6□□□□□ -1.67
LINC00342-201ENST00000412393 TMED7Q9Y3B3 224 aa4.6□□□□□ -1.67
LINC00342-201ENST00000412393 HDGFL3Q9Y3E1 203 aa4.6□□□□□ -1.67
LINC00342-201ENST00000412393 ALPK2Q86TB3 2170 aa4.6□□□□□ -1.67
LINC00342-201ENST00000412393 FLNAP21333 2647 aaKnown RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 IGKV3D-15A0A087WSY6 115 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 A0A0G2JPF8 293 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 TMEM72A0PK05 275 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 RAB19A4D1S5 217 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 TRAPPC13A5PLN9 417 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 CDHR4A6H8M9 788 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ZNF716A6NP11 495 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 HNRNPCL3B7ZW38 293 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 TEX46H3BTG2 121 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 J3KTA2 159 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 HS3ST1O14792 307 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 OGG1O15527 345 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ZNF208O43345 1280 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 RNF13O43567 381 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 LANCL1O43813 399 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 SSX5O60225 188 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 OR10H3O60404 316 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 GMDSO60547 372 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 EIF1BO60739 113 aaKnown RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 GATBO75879 557 aaKnown RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 LYZL6O75951 148 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 SERPINA3P01011 423 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 IGHV3-9P01782 118 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 HIST1H2ABP04908 130 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 IFNA4P05014 189 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 BCHEP06276 602 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 HEXAP06865 529 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 GKN3PP0CG01 181 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 HNRNPCL4P0DMR1 293 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 IFI30P13284 250 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 CR1P17927 2039 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 IGHV1-2P23083 117 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 CXCR1P25024 350 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 FPR3P25089 353 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 EDNRAP25101 427 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 PAX6P26367 422 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 TACR3P29371 465 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 S100A11P31949 105 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 MTORP42345 2549 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 GDI2P50395 445 aaKnown RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 AP3S2P59780 193 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ZP1P60852 638 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 MAP1AP78559 2803 aaPredicted RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 FGL1Q08830 312 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 CHD3Q12873 2000 aaKnown RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 BTN1A1Q13410 526 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 HLXQ14774 488 aaPredicted RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 PPA1Q15181 289 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ZSWIM7Q19AV6 140 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 NCMAPQ5T1S8 102 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 OLFML2AQ68BL7 652 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ZNF57Q68EA5 555 aaPredicted RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ABLIM2Q6H8Q1 611 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 PODNL1Q6PEZ8 512 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 PAQR6Q6TCH4 344 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 GLDNQ6ZMI3 551 aaPredicted RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ZNF836Q6ZNA1 936 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 MOB3CQ70IA8 216 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 HIST3H2AQ7L7L0 130 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 NR2C2APQ86WQ0 139 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 GID4Q8IVV7 300 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 PDZD9Q8IXQ8 264 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 TOMM5Q8N4H5 51 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ACBD7Q8N6N7 88 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ZNF611Q8N823 705 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 OR4K5Q8NGD3 323 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 OR2T35Q8NGX2 323 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 PIGXQ8TBF5 258 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 TMEM171Q8WVE6 324 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 NSMAFQ92636 917 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 HIST1H2ACQ93077 130 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 MARC2Q969Z3 335 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 APH1AQ96BI3 265 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 DDIT4LQ96D03 193 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 MUCL1Q96DR8 90 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 PERPQ96FX8 193 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 TMEM19Q96HH6 336 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ZNF469Q96JG9 3925 aaPredicted RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 C18orf12Q96KH6 178 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 PRRC1Q96M27 445 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 Q96MF0 132 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 MOGAT1Q96PD6 335 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 NAA11Q9BSU3 229 aaPredicted RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 POTEKPQ9BYX7 375 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 HDHD2Q9H0R4 259 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 NUDT15Q9NV35 164 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 COA4Q9NYJ1 87 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 TVP23BQ9NYZ1 205 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 MGAT4CQ9UBM8 478 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 IL20RAQ9UHF4 553 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 SPATA2Q9UM82 520 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 ZNF443Q9Y2A4 671 aaPredicted RBP4.59□□□□□ -1.67
LINC00342-201ENST00000412393 RNF115Q9Y4L5 304 aa4.59□□□□□ -1.67
LINC00342-201ENST00000412393 YLPM1P49750 1951 aaKnown RBP4.58□□□□□ -1.68
LINC00342-201ENST00000412393 SETD2Q9BYW2 2564 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms