RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 OR13G1Q8NGZ3 307 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 FAM45AQ8TCE6 357 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 BLOC1S5Q8TDH9 187 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 NELFBQ8WX92 580 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 SMIM19Q96E16 107 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 PGLYRP3Q96LB9 341 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 FAM19A4Q96LR4 140 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 KCTD7Q96MP8 289 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 RBP7Q96R05 134 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 TMEM208Q9BTX3 173 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 NUDT9Q9BW91 350 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 MFSD1Q9H3U5 465 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 NDRG2Q9UN36 371 aaKnown RBP3.35□□□□□ -1.87
BRCA1-204ENST00000412061 F11RQ9Y624 299 aaKnown RBP3.35□□□□□ -1.87
BRCA1-204ENST00000412061 CHD4Q14839 1912 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 IGHV3OR16-9A0A0B4J2B5 98 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 A0A0G2JN53 185 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 A0A0J9YXY3 114 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 A0A1W2PPR1 153 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 A0A1W2PQL4 384 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-204ENST00000412061 H0Y9J4 135 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 SYNGR1O43759 233 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 GLSO94925 669 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-204ENST00000412061 CGAP01215 116 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 IGHV3-13P01766 116 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 PCCAP05165 728 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-204ENST00000412061 CALB1P05937 261 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 MMP7P09237 267 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-204ENST00000412061 MDH2P40926 338 aaKnown RBP3.34□□□□□ -1.87
BRCA1-204ENST00000412061 CDKN2BP42772 138 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF138P52744 262 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 AP2S1P53680 142 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-204ENST00000412061 TAS2R46P59540 309 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF45Q02386 682 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 RGNQ15493 299 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 NSDHLQ15738 373 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 GUCA2BQ16661 112 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 TTLL9Q3SXZ7 439 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 ACSM3Q53FZ2 586 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 TTC32Q5I0X7 151 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 COA6Q5JTJ3 125 aaKnown RBP3.34□□□□□ -1.87
BRCA1-204ENST00000412061 LPCAT4Q643R3 524 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 STEAP4Q687X5 459 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 DNAJC24Q6P3W2 148 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 STRADAQ7RTN6 431 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 C10orf67Q8IYJ2 551 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 UBAC2Q8NBM4 344 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 MAPK1IP1LQ8NDC0 245 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 OR4S2Q8NH73 311 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 UCN3Q969E3 161 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 LRRC58Q96CX6 371 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 DDIT4LQ96D03 193 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 DNAJC19Q96DA6 116 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF702PQ9H963 129 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 SPANXB1Q9NS25 103 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF581Q9P0T4 197 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 KLK13Q9UKR3 277 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 RAB22AQ9UL26 194 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 ORC6Q9Y5N6 252 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 HEBP2Q9Y5Z4 205 aa3.34□□□□□ -1.87
BRCA1-204ENST00000412061 SMIM26A0A096LP01 95 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 A0A0J9YXV3 536 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 C21orf140B9A014 251 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 CCRL2O00421 344 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 PFDN6O15212 129 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 PI15O43692 258 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 SSNA1O43805 119 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 RP2O75695 350 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 CTDNEP1O95476 244 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 ASS1P00966 412 aaKnown RBP3.33□□□□□ -1.88
BRCA1-204ENST00000412061 IGHV3-23P01764 117 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 CD74P04233 296 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 FABP3P05413 133 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 IGKV5-2P06315 115 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 C8orf88P0DMB2 117 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 SLC2A1P11166 492 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 RAB3AP20336 220 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 PAX6P26367 422 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 CD70P32970 193 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 IDH2P48735 452 aaKnown RBP3.33□□□□□ -1.88
BRCA1-204ENST00000412061 RAP1GDS1P52306 607 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 DIO3P55073 304 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 NAB1Q13506 487 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 TOMM34Q15785 309 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-204ENST00000412061 SNCBQ16143 134 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 GSG1Q2KHT4 349 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 CDNFQ49AH0 187 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 DNM1P34Q6PK57 102 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 PLET1Q6UQ28 207 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 LGI3Q8N145 548 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 COX18Q8N8Q8 333 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 OR10G9Q8NGN4 311 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 OR6N1Q8NGY5 312 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 BLNKQ8WV28 456 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 GTSF1Q8WW33 167 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 HGDQ93099 445 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 SEH1LQ96EE3 360 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 GALNT14Q96FL9 552 aa3.33□□□□□ -1.88
BRCA1-204ENST00000412061 TEAD3Q99594 435 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms