RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 C1orf87Q8N0U7 546 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 FAM71E2Q8N5Q1 922 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 LILRA3Q8N6C8 439 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 NKAIN3Q8N8D7 197 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 MFSD9Q8NBP5 474 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 CASTOR1Q8WTX7 329 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 LIPHQ8WWY8 451 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 FRZBQ92765 325 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 CMBLQ96DG6 245 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 DTD2Q96FN9 168 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 MRGPRX4Q96LA9 322 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 ADAD1Q96M93 576 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 WFIKKN1Q96NZ8 548 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 SMAD5Q99717 465 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 GPR87Q9BY21 358 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 FBXL17Q9UF56 701 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 GPR34Q9UPC5 381 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 GAB2Q9UQC2 676 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 IER3IP1Q9Y5U9 82 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 HS3ST3B1Q9Y662 390 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 LOC100509620A0A075B734 347 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 A0A1W2PPQ1 181 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 TMEM235A6NFC5 223 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ELOA3DA6NLF2 546 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 PEX12O00623 359 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 HSD17B6O14756 317 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 SLC31A1O15431 190 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 AMBPP02760 352 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 IFNA6P05013 189 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 EDN3P14138 238 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF708P17019 499 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ALOX5APP20292 161 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 HIST1H1TP22492 207 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 G0S2P27469 103 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 FCGR2CP31995 323 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 MC3RP41968 323 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 CAMLGP49069 296 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 TNFSF10P50591 281 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 RPS4XP62701 263 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF117Q03924 483 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 TMEM241Q24JQ0 296 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 EMC4Q5J8M3 183 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 MRPL2Q5T653 305 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 FCRL6Q6DN72 434 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 LEG1Q6P5S2 330 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF627Q7L945 461 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 FJX1Q86VR8 437 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 AGBL5Q8NDL9 886 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 NOXO1Q8NFA2 376 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 OR52N4Q8NGI2 321 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 BAHD1Q8TBE0 780 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 SCAMP4Q969E2 229 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 OR2M4Q96R27 311 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 HDAC8Q9BY41 377 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 CTDSP1Q9GZU7 261 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 CRLF2Q9HC73 371 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 CHST11Q9NPF2 352 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 KIAA1456Q9P272 454 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 CKLFQ9UBR5 152 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 MMP24Q9Y5R2 645 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF780BQ9Y6R6 833 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 SMG1Q96Q15 3661 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 FAM171A2A8MVW0 826 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 K7N7A8 449 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 KCNAB3O43448 404 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 DEDDO75618 318 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 SRP19P09132 144 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 AKR1C4P17516 323 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ECI1P42126 302 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 LSSP48449 732 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 GNG10P50151 68 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 TMEM33P57088 247 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 CLDN2P57739 230 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 NXPH1P58417 271 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ERVFRD-1P60508 538 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 UBE2KP61086 200 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 HSF1Q00613 529 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 DUSP2Q05923 314 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 TRIP6Q15654 476 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 FBXW9Q5XUX1 488 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 CLEC18BQ6UXF7 455 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF793Q6ZN11 406 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 Q6ZVL8 140 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF765Q7L2R6 523 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 SLC22A18ASQ8N1D0 253 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 AMER3Q8N944 861 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ADPRHL1Q8NDY3 354 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 OR2L2Q8NH16 312 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 POC1BQ8TC44 478 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 IFI44Q8TCB0 444 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNRF4Q8WWF5 429 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 TMEM230Q96A57 120 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 INSM2Q96T92 566 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 TTTY10Q9BZA0 68 aa9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 GSX1Q9H4S2 264 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-204ENST00000409357 WDR76Q9H967 626 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms