RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 ADAT1Q9BUB4 502 aaKnown RBP17.57■□□□□ 0.4
C4orf48-201ENST00000409248 YLPM1P49750 1951 aaKnown RBP17.57■□□□□ 0.4
C4orf48-201ENST00000409248 NSD1Q96L73 2696 aaPredicted RBP17.56■□□□□ 0.4
C4orf48-201ENST00000409248 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.56■□□□□ 0.4
C4orf48-201ENST00000409248 A0A1B0GWJ7 208 aa17.56■□□□□ 0.4
C4orf48-201ENST00000409248 LRP5LA4QPB2 252 aa17.56■□□□□ 0.4
C4orf48-201ENST00000409248 MAGEA13PA6NCF6 341 aa17.56■□□□□ 0.4
C4orf48-201ENST00000409248 GMDSO60547 372 aa17.56■□□□□ 0.4
C4orf48-201ENST00000409248 CPEP16870 476 aa17.56■□□□□ 0.4
C4orf48-201ENST00000409248 MS4A15Q8N5U1 240 aa17.56■□□□□ 0.4
C4orf48-201ENST00000409248 PIGCQ92535 297 aa17.56■□□□□ 0.4
C4orf48-201ENST00000409248 RGP1Q92546 391 aaPredicted RBP17.56■□□□□ 0.4
C4orf48-201ENST00000409248 MPC1Q9Y5U8 109 aa17.56■□□□□ 0.4
C4orf48-201ENST00000409248 CACNG2Q9Y698 323 aa17.56■□□□□ 0.4
C4orf48-201ENST00000409248 ANXA2P2A6NMY6 339 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 ZNF850A8MQ14 1090 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 IFNL4K9M1U5 179 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 MLNRO43193 412 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 HLA-DPB1P04440 258 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 CD2P06729 351 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 OCM2P0CE71 109 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 ZNF16P17020 682 aaPredicted RBP17.55■□□□□ 0.4
C4orf48-201ENST00000409248 MZT1Q08AG7 82 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 PRDX4Q13162 271 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 CLVS2Q5SYC1 327 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 KRT74Q7RTS7 529 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 ZDHHC23Q8IYP9 409 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 SPERTQ8NA61 448 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 OR8S1Q8NH09 359 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 MEGF10Q96KG7 1140 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 YAE1D1Q9NRH1 226 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 PPP1R3CQ9UQK1 317 aa17.55■□□□□ 0.4
C4orf48-201ENST00000409248 TRIM64CA6NLI5 447 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 LMX1BO60663 402 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 GATBO75879 557 aaKnown RBP17.54■□□□□ 0.4
C4orf48-201ENST00000409248 INMTO95050 263 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 SERPINA3P01011 423 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 SOX2P48431 317 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 PHC2Q8IXK0 858 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 OR13C5Q8NGS8 318 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 CLDND2Q8NHS1 167 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 PP6455Q8WZ26 134 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 THRSPQ92748 146 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 FGGYQ96C11 551 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 HIST1H2AAQ96QV6 131 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 TMED9Q9BVK6 235 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 NARFLQ9H6Q4 476 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 TMEM106BQ9NUM4 274 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 TREM2Q9NZC2 230 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 WIPI2Q9Y4P8 454 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 DYSFO75923 2080 aa17.54■□□□□ 0.4
C4orf48-201ENST00000409248 TRBV5-5A0A0J9YX44 114 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 ANKRD61A6NGH8 418 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 A6NIN4 97 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 A8MV72 311 aaPredicted RBP17.53■□□□□ 0.4
C4orf48-201ENST00000409248 F5H5P2 479 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 H0YL77 283 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 NRASP01111 189 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 SMIM18P0DKX4 95 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 PSMA1P25786 263 aaKnown RBP17.53■□□□□ 0.4
C4orf48-201ENST00000409248 TRAM1Q15629 374 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 Q499Y3 187 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 SPRNQ5BIV9 151 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 AVPI1Q5T686 147 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 SYT6Q5T7P8 510 aaPredicted RBP17.53■□□□□ 0.4
C4orf48-201ENST00000409248 PLCXD3Q63HM9 321 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 TMEM42Q69YG0 159 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 MOB3CQ70IA8 216 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 CELF2-AS1Q8N7Q2 184 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 DVL3Q92997 716 aaPredicted RBP17.53■□□□□ 0.4
C4orf48-201ENST00000409248 MUL1Q969V5 352 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 ADAT3Q96EY9 351 aaPredicted RBP17.53■□□□□ 0.4
C4orf48-201ENST00000409248 MICU1Q9BPX6 476 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 MRPS26Q9BYN8 205 aaKnown RBP17.53■□□□□ 0.4
C4orf48-201ENST00000409248 CHST5Q9GZS9 411 aa17.53■□□□□ 0.4
C4orf48-201ENST00000409248 C2CD3Q4AC94 2353 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 INAFM1C9JVW0 142 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 CCRL2O00421 344 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 MAPK3P27361 379 aaPredicted RBP17.52■□□□□ 0.4
C4orf48-201ENST00000409248 CD200P41217 278 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 RPS11P62280 158 aaKnown RBP eCLIP17.52■□□□□ 0.4
C4orf48-201ENST00000409248 FAM166AQ6J272 317 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 TMEM106AQ96A25 262 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 RAB39BQ96DA2 213 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 MSI2Q96DH6 328 aaKnown RBP17.52■□□□□ 0.4
C4orf48-201ENST00000409248 TECTBQ96PL2 329 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 RTL8AQ9BWD3 113 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 GCM1Q9NP62 436 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 GPR173Q9NS66 373 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 C14orf119Q9NWQ9 140 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 NDUFB11Q9NX14 153 aa17.52■□□□□ 0.4
C4orf48-201ENST00000409248 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.52■□□□□ 0.39
C4orf48-201ENST00000409248 LOC100289279A0A1B0GTE1 492 aa17.51■□□□□ 0.39
C4orf48-201ENST00000409248 ISPDA4D126 451 aa17.51■□□□□ 0.39
C4orf48-201ENST00000409248 LRRC30A6NM36 301 aa17.51■□□□□ 0.39
C4orf48-201ENST00000409248 ZNF879B4DU55 563 aa17.51■□□□□ 0.39
C4orf48-201ENST00000409248 GABRA5P31644 462 aa17.51■□□□□ 0.39
C4orf48-201ENST00000409248 IL2RGP31785 369 aa17.51■□□□□ 0.39
C4orf48-201ENST00000409248 GATA4P43694 442 aa17.51■□□□□ 0.39
C4orf48-201ENST00000409248 RPS25P62851 125 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms