RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 WARSP23381 471 aaKnown RBP3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 IVDP26440 423 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 RCVRNP35243 200 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 EIF1P41567 113 aaKnown RBP3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 MAGEA2P43356 314 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 MAGEA6P43360 314 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 FABP6P51161 128 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF138P52744 262 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 PRR3P79522 188 aaKnown RBP3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 HPCAP84074 193 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 TNFRSF9Q07011 255 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 SMCO1Q147U7 214 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 LYPD2Q6UXB3 125 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF493Q6ZR52 646 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 FAM92BQ6ZTR7 304 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 HORMAD1Q86X24 394 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 DHFR2Q86XF0 187 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 HS3ST5Q8IZT8 346 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 ACBD4Q8NC06 268 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR2L5Q8NG80 312 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR5AR1Q8NGP9 310 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 BLOC1S5Q8TDH9 187 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 APH1BQ8WW43 257 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 DNAJB3Q8WWF6 145 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 BAALCQ8WXS3 180 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 AP3S1Q92572 193 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 HGDQ93099 445 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 CREB3L1Q96BA8 519 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 RNF185Q96GF1 192 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 FAM210BQ96KR6 192 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 IMMP1LQ96LU5 166 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 WFIKKN1Q96NZ8 548 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 AGMATQ9BSE5 352 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 MED10Q9BTT4 135 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 UBE2ZQ9H832 354 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 MYOZ1Q9NP98 299 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 FAIMQ9NVQ4 179 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 MCUBQ9NWR8 336 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 FLVCR2Q9UPI3 526 aa3.38□□□□□ -1.87
HMGB1P13-201ENST00000406019 TET2Q6N021 2002 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 PDS5BQ9NTI5 1447 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 PLAC8L1A1L4L8 177 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 MPDU1O75352 247 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 ENTPD5O75356 428 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 KLF8O95600 359 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 LY6G6DO95868 133 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 CST4P01036 141 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 INSP01308 110 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 HOXC4P09017 264 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 KLK2P20151 261 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 USF1P22415 310 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 NAA20P61599 178 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 ARF6P62330 175 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 SLC7A9P82251 487 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 STX4Q12846 297 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 SLC39A6Q13433 755 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 FLOT2Q14254 428 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 VAMP3Q15836 100 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 IMPG1Q17R60 797 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 RSBN1Q5VWQ0 802 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 ABHD13Q7L211 337 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 STRADAQ7RTN6 431 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 OAFQ86UD1 273 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 STK40Q8N2I9 435 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 ARRDC1Q8N5I2 433 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 FAM172AQ8WUF8 416 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 MAFIPQ8WZ33 124 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 TFGQ92734 400 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 CPNE4Q96A23 557 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 FAM131CQ96AQ9 280 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 EXOSC8Q96B26 276 aaKnown RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 DNAJC19Q96DA6 116 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 SGTBQ96EQ0 304 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 GALNT14Q96FL9 552 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 MRPL48Q96GC5 212 aaKnown RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 PRAP1Q96NZ9 151 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 TEAD3Q99594 435 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 UTP23Q9BRU9 249 aaKnown RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 SRRQ9GZT4 340 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 PCBD2Q9H0N5 130 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 LINC00597Q9H2U6 94 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 C1orf198Q9H425 327 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 C11orf49Q9H6J7 331 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 IFT46Q9NQC8 304 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 SIRT7Q9NRC8 400 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 RMND1Q9NWS8 449 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 COA4Q9NYJ1 87 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNF226Q9NYT6 803 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 NXT1Q9UKK6 140 aaKnown RBP3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 CLUHO75153 1309 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 NFASCO94856 1347 aa3.37□□□□□ -1.87
HMGB1P13-201ENST00000406019 RFPL4AA6NLU0 287 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 ANKRD65E5RJM6 399 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 RFPL4AL1F8VTS6 287 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 VAPBO95292 243 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 CATP04040 527 aaKnown RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 TCRBP04435 133 aa3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 PCCAP05165 728 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P13-201ENST00000406019 NBEAP1P0C6P0 100 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms