RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 OPN5Q6U736 354 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 ENPP6Q6UWR7 440 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 BTNL3Q6UXE8 466 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 MISPQ8IVT2 679 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 GPR32P1Q8NGA4 272 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 FBXO30Q8TB52 745 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 RNF138Q8WVD3 245 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 GEMIN6Q8WXD5 167 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 TMBIM1Q969X1 311 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 C7orf34Q96L11 122 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 CCNL2Q96S94 520 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 OSBPL10Q9BXB5 764 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 POLR2J2Q9GZM3 115 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 POLR2J3Q9H1A7 115 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF160Q9HCG1 818 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 EXOSC3Q9NQT5 275 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 KLHL28Q9NXS3 571 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 C6orf203Q9P0P8 240 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 STX18Q9P2W9 335 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 FOXJ3Q9UPW0 622 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF443Q9Y2A4 671 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC35A3Q9Y2D2 325 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 MRPS18BQ9Y676 258 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 ENPP4Q9Y6X5 453 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 ALPK2Q86TB3 2170 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 FREM2Q5SZK8 3169 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZFHX4Q86UP3 3567 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 ASPMQ8IZT6 3477 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 IGF2RP11717 2491 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ARHGAP21Q5T5U3 1957 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 LOC400499M0QZD8 3231 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 NCOR2Q9Y618 2525 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 IGLV3-32A0A0A0MS00 114 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 H3BNH8 94 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 H3BTX0 84 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 WWP2O00308 870 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 FAAHO00519 579 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 CASQ2O14958 399 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 TPST1O60507 370 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 EIF4E2O60573 245 aaKnown RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ICOSLGO75144 302 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 UGT2B11O75310 529 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR2J2O76002 312 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 UTS2O95399 124 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC2A10O95528 541 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ATP6V1G2O95670 118 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 OXSR1O95747 527 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF682O95780 498 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 EPPINO95925 133 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 OPN1SWP03999 348 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 IFNW1P05000 195 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 FABP3P05413 133 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 IGFBP1P08833 259 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 GIG44P09565 113 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 THRBP10828 461 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 PGAM2P15259 253 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 HPGDP15428 266 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 PAICSP22234 425 aaKnown RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 FASP25445 335 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 IFNA8P32881 189 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 EVI2BP34910 448 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 GCKP35557 465 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ACVR1BP36896 505 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ALDH3B2P48448 385 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 HLCSP50747 726 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 SSR4P51571 173 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 UCNP55089 124 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 RGS8P57771 180 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 CDC20Q12834 499 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 IL18R1Q13478 541 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 RCN1Q15293 331 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ATP6AP1Q15904 470 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 NNATQ16517 81 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 MAPK14Q16539 360 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF791Q3KP31 576 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 PDZK1Q5T2W1 519 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 CCNJQ5T5M9 372 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 MRPL2Q5T653 305 aaKnown RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLX4IPQ5VYV7 408 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR2T5Q6IEZ7 315 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF836Q6ZNA1 936 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF550Q7Z398 422 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 VTCN1Q7Z7D3 282 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 GALNT10Q86SR1 603 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ADCK1Q86TW2 530 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 VASH2Q86V25 355 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 CYP4Z1Q86W10 505 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 VRK2Q86Y07 508 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZDHHC21Q8IVQ6 265 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 TMEM156Q8N614 296 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 FAM86B1Q8N7N1 296 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR2T29Q8NH02 315 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZPLD1Q8TCW7 415 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 PAQR8Q8TEZ7 354 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 PHF10Q8WUB8 498 aaKnown RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 PYDC1Q8WXC3 89 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 HGDQ93099 445 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 EFHD2Q96C19 240 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 NRBF2Q96F24 287 aa3.69□□□□□ -1.82
HMGB3P19-201ENST00000403971 CENPNQ96H22 339 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms