RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 NPRL2Q8WTW4 380 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 DERL3Q96Q80 235 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 GCM1Q9NP62 436 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 ANXA2P2A6NMY6 339 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 SSX4O60224 188 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 PTBP3O95758 552 aaKnown RBP13.48□□□□□ -0.25
HMGA1-204ENST00000401473 SERPINA3P01011 423 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 GRPP07492 148 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 TNFSF4P23510 183 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 PMELP40967 661 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 ZNF154Q13106 437 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 ZNF529Q6P280 563 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 SPERTQ8NA61 448 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 OR5A2Q8NGI9 324 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 OR51A2Q8NGJ7 313 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 OR13C9Q8NGT0 318 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 ZNF420Q8TAQ5 688 aaPredicted RBP13.48□□□□□ -0.25
HMGA1-204ENST00000401473 YIPF5Q969M3 257 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 TMIGD2Q96BF3 282 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 CXXC4Q9H2H0 198 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 ZCCHC4Q9H5U6 513 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 NOX4Q9NPH5 578 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 DCAF16Q9NXF7 216 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 IGKV1-27A0A075B6S5 117 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 TRAV8-7A0A075B6U6 113 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 ZNF732B4DXR9 585 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 CD2P06729 351 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 DAOP14920 347 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 TGFBR2P37173 567 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 CRYBB2P43320 205 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 HOXA4Q00056 320 aaPredicted RBP13.47□□□□□ -0.25
HMGA1-204ENST00000401473 CRIP3Q6Q6R5 217 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 CD200R1LQ6Q8B3 271 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 CEACAM19Q7Z692 300 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 KRTAP1-3Q8IUG1 177 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 ZNF525Q8N782 197 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 CELF2-AS1Q8N7Q2 184 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 HIST1H2AAQ96QV6 131 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 EGLN1Q9GZT9 426 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 UFSP2Q9NUQ7 469 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 TAS2R4Q9NYW5 299 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 TANC2Q9HCD6 1990 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 ACANP16112 2415 aa13.47□□□□□ -0.25
HMGA1-204ENST00000401473 FLNAP21333 2647 aaKnown RBP13.47□□□□□ -0.25
HMGA1-204ENST00000401473 GABRPO00591 440 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 ERCC1P07992 297 aaPredicted RBP13.46□□□□□ -0.25
HMGA1-204ENST00000401473 IGFBP3P17936 291 aaPredicted RBP13.46□□□□□ -0.25
HMGA1-204ENST00000401473 GATA4P43694 442 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 SRP9P49458 86 aaKnown RBP13.46□□□□□ -0.25
HMGA1-204ENST00000401473 ZNF826PQ6ZT77 177 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 OR1M1Q8NGA1 313 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 TRMT10AQ8TBZ6 339 aaKnown RBP13.46□□□□□ -0.25
HMGA1-204ENST00000401473 CCL17Q92583 94 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 SPACA5Q96QH8 159 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 MICU1Q9BPX6 476 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 MRPS26Q9BYN8 205 aaKnown RBP13.46□□□□□ -0.25
HMGA1-204ENST00000401473 ITGB1BP2Q9UKP3 347 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 PPP1R3CQ9UQK1 317 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 NOP16Q9Y3C1 178 aaKnown RBP13.46□□□□□ -0.25
HMGA1-204ENST00000401473 HIVEP1P15822 2718 aa13.46□□□□□ -0.25
HMGA1-204ENST00000401473 IGHV1-69-2A0A0G2JMI3 117 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.46□□□□□ -0.26
HMGA1-204ENST00000401473 PQLC2LA1A4F0 135 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 CD36P16671 472 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 ATF1P18846 271 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 TNFRSF1AP19438 455 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 ART1P52961 327 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 GNG3P63215 75 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 TESK1Q15569 626 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 MOGAT3Q86VF5 341 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 LRRC75A-AS1Q8N1F1 130 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 RPL3LQ92901 407 aaKnown RBP13.46□□□□□ -0.26
HMGA1-204ENST00000401473 FOXC2Q99958 501 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 RTL8AQ9BWD3 113 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 OR51I2Q9H344 312 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 VCX3AQ9NNX9 186 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 C14orf119Q9NWQ9 140 aa13.46□□□□□ -0.26
HMGA1-204ENST00000401473 FAM230AA0A1W2PPH8 454 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 C3orf80F5H4A9 247 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 CDIPTO14735 213 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 SULT1B1O43704 296 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 RP2O75695 350 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 GATBO75879 557 aaKnown RBP13.45□□□□□ -0.26
HMGA1-204ENST00000401473 ALX3O95076 343 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 PSMA1P25786 263 aaKnown RBP13.45□□□□□ -0.26
HMGA1-204ENST00000401473 TRAM1Q15629 374 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 ANGPTL5Q86XS5 388 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 CALHM1Q8IU99 346 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 SCCPDHQ8NBX0 429 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 RDH5Q92781 318 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 OR51E2Q9H255 320 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 ABCB9Q9NP78 766 aa13.45□□□□□ -0.26
HMGA1-204ENST00000401473 OR5B21A6NL26 309 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 GPX5O75715 221 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 RGS9O75916 674 aaPredicted RBP13.44□□□□□ -0.26
HMGA1-204ENST00000401473 UCHL1P09936 223 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 SRMP19623 302 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 AZGP1P25311 298 aaKnown RBP13.44□□□□□ -0.26
HMGA1-204ENST00000401473 FUT6P51993 359 aa13.44□□□□□ -0.26
HMGA1-204ENST00000401473 DNM1P46Q6ZS02 220 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms