RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 OR3A4PP47883 348 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 RORCP51449 518 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 ADAM5Q6NVV9 412 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 DEGS2Q6QHC5 323 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 SAMD12Q8N8I0 201 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 OR10AD1Q8NGE0 317 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 MMP28Q9H239 520 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 SMURF1Q9HCE7 757 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 MSL2Q9HCI7 577 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 TBC1D24Q9ULP9 559 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 SLC25A15Q9Y619 301 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 FASNP49327 2511 aaKnown RBP10.07□□□□□ -0.8
SKA3-203ENST00000400018 A0A075B6Q4 140 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 TRBV5-7A0A0A0MS05 114 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 ANXA2P2A6NMY6 339 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 ZNF850A8MQ14 1090 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 THBDP07204 575 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 TNFSF8P32971 234 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 UGT2B10P36537 528 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 CCR9P51686 369 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 PCBD1P61457 104 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 SPRNQ5BIV9 151 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 SFRP4Q6FHJ7 346 aaPredicted RBP10.06□□□□□ -0.8
SKA3-203ENST00000400018 FDX2Q6P4F2 183 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 OR8H2Q8N162 312 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 OR1J1Q8NGS3 322 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 SLC25A40Q8TBP6 338 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 MARVELD3Q96A59 401 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 SLC23A1Q9UHI7 598 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 DUSP13Q9UII6 198 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 FBN2P35556 2912 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 ABCA12Q86UK0 2595 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 IGKV1-27A0A075B6S5 117 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 KDM4BO94953 1096 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 ZNF20P17024 532 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 ELK1P19419 428 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 GSK3AP49840 483 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 ZNF45Q02386 682 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 ZNF767PQ75MW2 155 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 UBASH3BQ8TF42 649 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 CMBLQ96DG6 245 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 HS3ST6Q96QI5 342 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 BCL7BQ9BQE9 202 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 SFXN3Q9BWM7 321 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 BANF2Q9H503 90 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 CNTD2Q9H8S5 307 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 ERRFI1Q9UJM3 462 aaPredicted RBP10.06□□□□□ -0.8
SKA3-203ENST00000400018 MEIS3P1A6NDR6 274 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 C19orf84I3L1E1 186 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 UBL3O95164 117 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 HCKP08631 526 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 CA6P23280 308 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 BTN1A1Q13410 526 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 TMEM244Q5VVB8 128 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 BRICD5Q6PL45 260 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 CRIP3Q6Q6R5 217 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 FIP1L1Q6UN15 594 aaKnown RBP10.06□□□□□ -0.8
SKA3-203ENST00000400018 ZNF671Q8TAW3 534 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 PCNPQ8WW12 178 aaKnown RBP10.06□□□□□ -0.8
SKA3-203ENST00000400018 ZNF488Q96MN9 340 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 SDHCQ99643 169 aaPredicted RBP10.06□□□□□ -0.8
SKA3-203ENST00000400018 VKORC1Q9BQB6 163 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 SYT3Q9BQG1 590 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 MED18Q9BUE0 208 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 HSPB11Q9Y547 144 aa10.06□□□□□ -0.8
SKA3-203ENST00000400018 MEX3AA1L020 520 aaKnown RBP10.05□□□□□ -0.8
SKA3-203ENST00000400018 OR6C65A6NJZ3 312 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 SMLR1H3BR10 107 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 IL1AP01583 271 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 UBCP0CG48 685 aaKnown RBP10.05□□□□□ -0.8
SKA3-203ENST00000400018 ERP29P30040 261 aaKnown RBP10.05□□□□□ -0.8
SKA3-203ENST00000400018 OPRM1P35372 400 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 RFX2P48378 723 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 MMP15P51511 669 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 PPA1Q15181 289 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 DRAM2Q6UX65 266 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 PAMR1Q6UXH9 720 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 ZNF704Q6ZNC4 412 aaPredicted RBP10.05□□□□□ -0.8
SKA3-203ENST00000400018 PGAP1Q75T13 922 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 ZNF627Q7L945 461 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 CA5BP1Q8WTZ4 195 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 SEH1LQ96EE3 360 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 PAPOLGQ9BWT3 736 aaKnown RBP10.05□□□□□ -0.8
SKA3-203ENST00000400018 OR10A2Q9H208 303 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 DOPEY2Q9Y3R5 2298 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 CHD3Q12873 2000 aaKnown RBP10.05□□□□□ -0.8
SKA3-203ENST00000400018 MSTNO14793 375 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 SMPD2O60906 423 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 ACHEP22303 614 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 ARR3P36575 388 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 DDI2Q5TDH0 399 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 C19orf18Q8NEA5 215 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 OR8H1Q8NGG4 311 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 CEP19Q96LK0 163 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 GHITMQ9H3K2 345 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 ELL3Q9HB65 397 aaPredicted RBP10.05□□□□□ -0.8
SKA3-203ENST00000400018 CDH20Q9HBT6 801 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 GP6Q9HCN6 339 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 V9GY05 133 aa10.05□□□□□ -0.8
SKA3-203ENST00000400018 UBR5O95071 2799 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms