RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 GJC3Q8NFK1 279 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 SLC26A10Q8NG04 563 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 ZNRF4Q8WWF5 429 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 ANKRD60Q9BZ19 345 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 WARS2Q9UGM6 360 aaKnown RBP13.24□□□□□ -0.29
CUX2-202ENST00000397643 KCNG2Q9UJ96 466 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.24□□□□□ -0.29
CUX2-202ENST00000397643 CCDC182A6NF36 153 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 OOEPA6NGQ2 149 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 TVP23AA6NH52 213 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 MYF6P23409 242 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 LINC01590Q5TEZ4 76 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 VMO1Q7Z5L0 202 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 FAM90A1Q86YD7 464 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 FGFRL1Q8N441 504 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 BOLLQ8N9W6 283 aaKnown RBP13.23□□□□□ -0.29
CUX2-202ENST00000397643 ZNF511Q8NB15 262 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 FN3KRPQ9HA64 309 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 AASSQ9UDR5 926 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 POLR1DQ9Y2S0 133 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 KPTNQ9Y664 436 aa13.23□□□□□ -0.29
CUX2-202ENST00000397643 DVL1O14640 695 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 GYPAP02724 150 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 CA6P23280 308 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 ANOS1P23352 680 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 ATP6V1E1P36543 226 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 POU4F2Q12837 409 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 OR8B8Q15620 311 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 FAM189A2Q15884 450 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 C11orf91Q3C1V1 193 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 CDONQ4KMG0 1287 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 METAP1DQ6UB28 335 aaPredicted RBP13.22□□□□□ -0.29
CUX2-202ENST00000397643 CFAP77Q6ZQR2 320 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 REC114Q7Z4M0 266 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 NAA40Q86UY6 237 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 ERI1Q8IV48 349 aaKnown RBP13.22□□□□□ -0.29
CUX2-202ENST00000397643 GCSAMQ8N6F7 178 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 OR2AJ1Q8NGZ0 328 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 CNBD2Q96M20 576 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 INTS14Q96SY0 518 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 PNRC2Q9NPJ4 139 aaKnown RBP13.22□□□□□ -0.29
CUX2-202ENST00000397643 MRPL22Q9NWU5 206 aaKnown RBP13.22□□□□□ -0.29
CUX2-202ENST00000397643 HAO2Q9NYQ3 351 aa13.22□□□□□ -0.29
CUX2-202ENST00000397643 RPUSD1Q9UJJ7 312 aaKnown RBP13.22□□□□□ -0.29
CUX2-202ENST00000397643 TRAV38-1A0A0B4J264 116 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 A0A1B0GW55 424 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 ZNF593O00488 134 aaPredicted RBP13.21□□□□□ -0.29
CUX2-202ENST00000397643 NDUFA2O43678 99 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 WBP4O75554 376 aaKnown RBP13.21□□□□□ -0.29
CUX2-202ENST00000397643 ECDO95905 644 aaPredicted RBP13.21□□□□□ -0.29
CUX2-202ENST00000397643 FBP1P09467 338 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 DUX4L2P0CJ85 424 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 DUX4L3P0CJ86 424 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 DUX4L4P0CJ87 422 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 DUX4L5P0CJ88 424 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 DUX4L6P0CJ89 424 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 DUX4L7P0CJ90 424 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 TGFBR2P37173 567 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 ENTPD1P49961 510 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 PRB3Q04118 309 aaPredicted RBP13.21□□□□□ -0.29
CUX2-202ENST00000397643 HERPUD1Q15011 391 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 OR8G1Q15617 311 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 TEX30Q5JUR7 227 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 SLC35E4Q6ICL7 350 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 SLC18B1Q6NT16 456 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 DUX4L9Q6RFH8 374 aaPredicted RBP13.21□□□□□ -0.29
CUX2-202ENST00000397643 LYPD4Q6UWN0 246 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 ZNF826PQ6ZT77 177 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 SHFQ7M4L6 423 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 TIGD4Q8IY51 512 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 PLPP7Q8NBV4 271 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 LY6G5BQ8NDX9 201 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 CNIH3Q8TBE1 160 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 FBLIM1Q8WUP2 373 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 APH1BQ8WW43 257 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 CNN2Q99439 309 aaKnown RBP13.21□□□□□ -0.29
CUX2-202ENST00000397643 ADAT1Q9BUB4 502 aaKnown RBP13.21□□□□□ -0.29
CUX2-202ENST00000397643 CNTD2Q9H8S5 307 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 TRIM36Q9NQ86 728 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 KAAG1Q9UBP8 84 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 DUX4Q9UBX2 424 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 FBLN5Q9UBX5 448 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 FAM96BQ9Y3D0 163 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 RPL36Q9Y3U8 105 aaKnown RBP13.21□□□□□ -0.29
CUX2-202ENST00000397643 COMMD3-BMI1R4GMX3 469 aa13.21□□□□□ -0.29
CUX2-202ENST00000397643 A0A1B0GVI7 797 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 CD300LBA8K4G0 201 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 F5H5K5 113 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 GPR37O15354 613 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 DENRO43583 198 aaKnown RBP13.2□□□□□ -0.3
CUX2-202ENST00000397643 LHBP01229 141 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 SPARCP09486 303 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 TEX36Q5VZQ5 186 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 PGAP1Q75T13 922 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 SLC16A9Q7RTY1 509 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 LINC00346Q8IVM7 164 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 OR6N2Q8NGY6 317 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 SPRYD4Q8WW59 207 aaPredicted RBP13.2□□□□□ -0.3
CUX2-202ENST00000397643 CFHR4Q92496 578 aa13.2□□□□□ -0.3
CUX2-202ENST00000397643 RNFT2Q96EX2 444 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms