RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 GABRA4P48169 554 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 RPL27P61353 136 aaKnown RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 GPM6BQ13491 265 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 SLC25A43Q8WUT9 341 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 OR10A5Q9H207 317 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 OR10A2Q9H208 303 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 PRR13Q9NZ81 148 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 AMDHD2Q9Y303 409 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 CCDC187A0A096LP49 1063 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 H3BML4 177 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 IGFBP3P17936 291 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 TLE1Q04724 770 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ATPAF1Q5TC12 328 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 DCAF12L2Q5VW00 463 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 TMEM268Q5VZI3 342 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 C17orf78Q8N4C9 275 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 NUDT22Q9BRQ3 303 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ANAPC10Q9UM13 185 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 RCL1Q9Y2P8 373 aaKnown RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 IGLV1-36A0A0B4J1U3 117 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 LOC107986453A0A1B0GWG9 222 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 A0A1W2PPC1 479 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 OTOL1A6NHN0 477 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 KCNAB3O43448 404 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 DUS4LO95620 317 aaKnown RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF93P35789 620 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 FABP6P51161 128 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 HNRNPA3P51991 378 aaKnown RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 RPL7L1Q6DKI1 246 aaKnown RBP4.87□□□□□ -1.63
PTPRD-205ENST00000397611 HINT2Q9BX68 163 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 OR52A1Q9UKL2 312 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 SLC22A13Q9Y226 551 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 PSMB3P49720 205 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 CASP6P55212 293 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 IQCJQ1A5X6 159 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ACER2Q5QJU3 275 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ZAR1Q86SH2 424 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 FAM210BQ96KR6 192 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 GFI1Q99684 422 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 VAMP8Q9BV40 100 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 GPR87Q9BY21 358 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 HIPK2Q9H2X6 1198 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF286AQ9HBT8 521 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 MMP17Q9ULZ9 603 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 LTBP2Q14767 1821 aa4.87□□□□□ -1.63
PTPRD-205ENST00000397611 A0A0A6YYC8 382 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 NPIPA2E9PIF3 369 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 NPIPA3F8WFD2 350 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 I3L1I5 382 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 GEMIN2O14893 280 aaKnown RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 ST8SIA3O43173 380 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 DNPH1O43598 174 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 CST4P01036 141 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 HLA-DOBP13765 273 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 HOXB3P14651 431 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 CTSSP25774 331 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 CDKN2AP42771 156 aaKnown RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 SULT1A1P50225 295 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 RPL18Q07020 188 aaKnown RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 PMS2P11Q13670 270 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 CSRP2Q16527 193 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF787Q6DD87 383 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF611Q8N823 705 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 OR51A2Q8NGJ7 313 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 SLC37A2Q8TED4 501 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 IL1F10Q8WWZ1 152 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 TMEM37Q8WXS4 190 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 BTF3L4Q96K17 158 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 TSSK2Q96PF2 358 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 C6orf106Q9H6K1 298 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 ANKRD10Q9NXR5 420 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 SPAG17Q6Q759 2223 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 DHRS7CA6NNS2 312 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 CST2P09228 141 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 RAB32Q13637 225 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 INPP5JQ15735 1006 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF66Q6ZN08 573 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 MARCH3Q86UD3 253 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 ANGPTL5Q86XS5 388 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 DDIT4LQ96D03 193 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 C10orf35Q96D05 121 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 METTL9Q9H1A3 318 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 CARHSP1Q9Y2V2 147 aaKnown RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 MYOFQ9NZM1 2061 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 PRSS37A4D1T9 235 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 CD1CP29017 333 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 PTTG1IPP53801 180 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 POU3F1Q03052 451 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF385CQ66K41 422 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 SLC25A42Q86VD7 318 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 LGI3Q8N145 548 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 C19orf47Q8N9M1 422 aaKnown RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 TOX3O15405 576 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 VAMP5O95183 116 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 HPP00738 406 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 DAP3P51398 398 aaKnown RBP4.86□□□□□ -1.63
PTPRD-205ENST00000397611 LBX1P52954 281 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 ZNF90Q03938 601 aa4.86□□□□□ -1.63
PTPRD-205ENST00000397611 NCR3LG1Q68D85 454 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms