RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CAB39Q9Y376 341 aaPredicted RBP21.28■■□□□ 1
TSPAN4-207ENST00000397411 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.28■■□□□ 13e-9■■■□□ 17.3
TSPAN4-207ENST00000397411 TRAV38-1A0A0B4J264 116 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 OR5B21A6NL26 309 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 C3orf80F5H4A9 247 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 LGALS8O00214 317 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 PLPP2O43688 288 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 LIMS3P0CW19 117 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 LIMS4P0CW20 117 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 RPS2P15880 293 aaKnown RBP21.27■■□□□ 1
TSPAN4-207ENST00000397411 RIPPLY3P57055 190 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 NANOS3P60323 173 aaKnown RBP21.27■■□□□ 1
TSPAN4-207ENST00000397411 ST3GAL4Q11206 333 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 IZUMO2Q6UXV1 221 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 C11orf53Q8IXP5 236 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 SCCPDHQ8NBX0 429 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 HPSE2Q8WWQ2 592 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 TMEM186Q96B77 213 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 BEX2Q9BXY8 128 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 SHARPINQ9H0F6 387 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 HIF1ANQ9NWT6 349 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 SLC7A11Q9UPY5 501 aa21.27■■□□□ 1
TSPAN4-207ENST00000397411 TRAV20A0A0B4J274 112 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 CEACAM18A8MTB9 384 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 XPNPEP2O43895 674 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 FOXH1O75593 365 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 FSTL3O95633 263 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 RPSAP08865 295 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 CCDC159P0C7I6 412 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 ZNF20P17024 532 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 HNF1AP20823 631 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 HSPA13P48723 471 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 LCN2P80188 198 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 ZNF404Q494X3 552 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 ESCO2Q56NI9 601 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 WDR82Q6UXN9 313 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 Q6ZSR3 168 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 NLRC3Q7RTR2 1065 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 RNF166Q96A37 237 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 ZNF649Q9BS31 505 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 COMMD4Q9H0A8 199 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 PLCXD1Q9NUJ7 323 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 CNOT2Q9NZN8 540 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 HHLA2Q9UM44 414 aa21.26■□□□□ 0.99
TSPAN4-207ENST00000397411 ANKRD61A6NGH8 418 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 OOEPA6NGQ2 149 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 ISG15P05161 165 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 GMFBP60983 142 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 GCSAMQ8N6F7 178 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 OR8B3Q8NGG8 313 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 ZNF671Q8TAW3 534 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 FBLIM1Q8WUP2 373 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 NEIL1Q96FI4 390 aaPredicted RBP21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 OR8B2Q96RD0 313 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 TLNRD1Q9H1K6 362 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 TMEM160Q9NX00 188 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 SCN3BQ9NY72 215 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 PSORS1C1Q9UIG5 152 aa21.25■□□□□ 0.99
TSPAN4-207ENST00000397411 ABCA2Q9BZC7 2435 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 TRBV2A0A0J9YWF9 115 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 OR4C45A6NMZ5 311 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 E9PI62 339 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 CRLF1O75462 422 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 GATBO75879 557 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 WNT2P09544 360 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 PIPP12273 146 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 CPT2P23786 658 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 HOXA4Q00056 320 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 CR1LQ2VPA4 569 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 CHRFAM7AQ494W8 412 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 FAM76BQ5HYJ3 339 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 TMEM42Q69YG0 159 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 FAHD2BQ6P2I3 314 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 DCDC5Q6ZRR9 648 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 AHSA2Q719I0 299 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 OR13C3Q8NGS6 347 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 OR10Z1Q8NGY1 313 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 OR5AK2Q8NH90 309 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 FGGYQ96C11 551 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 C10orf35Q96D05 121 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 FAHD2AQ96GK7 314 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 FGF23Q9GZV9 251 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 OR51I2Q9H344 312 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 ERVK-18Q9QC07 812 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 LPAR3Q9UBY5 353 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 CLEC2DQ9UHP7 191 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 CDC42EP3Q9UKI2 254 aa21.24■□□□□ 0.99
TSPAN4-207ENST00000397411 IGHV3OR15-7A0A075B7D8 119 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 FAM230AA0A1W2PPH8 454 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 TMEM212A6NML5 194 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 NDUFA2O43678 99 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 LHBP01229 141 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 OCM2P0CE71 109 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 OCMP0CE72 109 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 TGM4P49221 684 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 MICBQ29980 383 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 C6orf141Q5SZD1 244 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 OR2G6Q5TZ20 316 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 LAIR2Q6ISS4 152 aa21.23■□□□□ 0.99
TSPAN4-207ENST00000397411 HAGHLQ6PII5 290 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms