RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 BTG2P78543 158 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 ELOBQ15370 118 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 TCTN3Q6NUS6 607 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 DND1Q8IYX4 353 aaKnown RBP12.59□□□□□ -0.39
COL4A3-202ENST00000396578 NEIL1Q96FI4 390 aaPredicted RBP12.59□□□□□ -0.39
COL4A3-202ENST00000396578 SEC11CQ9BY50 192 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 DEFB127Q9H1M4 99 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 LTB4R2Q9NPC1 389 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 P4HTMQ9NXG6 502 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 LY86O95711 162 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 SIGIRRQ6IA17 410 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 OR13H1Q8NG92 308 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 A0A087X0M5 115 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 A0A1B0GX30 115 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 ZNF195O14628 629 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 ONECUT2O95948 504 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 PTHLHP12272 177 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 PPICP45877 212 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 ADPRHP54922 357 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 LRRC10Q5BKY1 277 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 MISP3Q96FF7 219 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 TRMT61AQ96FX7 289 aaKnown RBP12.59□□□□□ -0.39
COL4A3-202ENST00000396578 TNFRSF10CO14798 259 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 SPINK4O60575 86 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 HRASP01112 189 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 PLA1AQ53H76 456 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 SIGLEC11Q96RL6 698 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 RAB40CQ96S21 281 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 CYSLTR2Q9NS75 346 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 OCIAD1Q9NX40 245 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 WSB2Q9NYS7 404 aaPredicted RBP12.59□□□□□ -0.39
COL4A3-202ENST00000396578 HDGFL3Q9Y3E1 203 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 M0QZK8 103 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 M0R2Z0 102 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 SLC17A2O00624 439 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 GGCTO75223 188 aaKnown RBP12.59□□□□□ -0.39
COL4A3-202ENST00000396578 ATF1P18846 271 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 EPHA2P29317 976 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 GUCA2AQ02747 115 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 MOB3BQ86TA1 216 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 OR8D4Q8NGM9 314 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 MAP1LC3CQ9BXW4 147 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 TBC1D29Q9UFV1 150 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 KRASP01116 189 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 EMDP50402 254 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 CLDN15P56746 228 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
COL4A3-202ENST00000396578 PHYHIPLQ96FC7 376 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 SMCHD1A6NHR9 2005 aa12.59□□□□□ -0.39
COL4A3-202ENST00000396578 POM121BA6NF01 834 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 SOCS7O14512 581 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 MEOX2P50222 304 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 HLXQ14774 488 aaPredicted RBP12.58□□□□□ -0.39
COL4A3-202ENST00000396578 Q56UQ5 140 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 Q8IYB0 196 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 SLC26A10Q8NG04 563 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 ROBO4Q8WZ75 1007 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 SCMH1Q96GD3 660 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 ICAM5Q9UMF0 924 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 ADAMTS5Q9UNA0 930 aa12.58□□□□□ -0.39
COL4A3-202ENST00000396578 IDSB3KWA1 339 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 CD96P40200 585 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 TMEM179BQ7Z7N9 219 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 FAM24BQ8N5W8 94 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 SLC45A2Q9UMX9 530 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 HELTA6NFD8 242 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 ZBTB42B2RXF5 422 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 NUDT8Q8WV74 236 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 AP4M1O00189 453 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 SPRY1O43609 319 aaPredicted RBP12.58□□□□□ -0.4
COL4A3-202ENST00000396578 FGF2P09038 288 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 CCDC190Q86UF4 302 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 NOXO1Q8NFA2 376 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 OR5C1Q8NGR4 320 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 IL22RA2Q969J5 263 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 POM121Q96HA1 1249 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 BCL2L10Q9HD36 194 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 F5H697 171 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 MASP2O00187 686 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 ADAM20O43506 726 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 MED29Q9NX70 200 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 FAHP16930 419 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 CD27P26842 260 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 AVPR2P30518 371 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 PYCR3Q53H96 274 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 C16orf52Q8NHV5 167 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 PRRX2Q99811 253 aa12.58□□□□□ -0.4
COL4A3-202ENST00000396578 PLEKHB1Q9UF11 243 aaPredicted RBP12.58□□□□□ -0.4
COL4A3-202ENST00000396578 FGF17O60258 216 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 FAM87AP0C7U9 286 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 KIR2DS2P43631 304 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 VMA21Q3ZAQ7 101 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 A4GNTQ9UNA3 340 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 HEATR5BQ9P2D3 2071 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 TDRD15B5MCY1 1934 aaKnown RBP12.57□□□□□ -0.4
COL4A3-202ENST00000396578 NDUFB6O95139 128 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 VWA2Q5GFL6 755 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 FAM27D1Q5T7N8 215 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 DYRK2Q92630 601 aa12.57□□□□□ -0.4
COL4A3-202ENST00000396578 MANBALQ9NQG1 85 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms