RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CNR1P21554 472 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 RFC3P40938 356 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 CASRP41180 1078 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 GSK3AP49840 483 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 KISS1Q15726 138 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 GSG1LQ6UXU4 331 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 TMED4Q7Z7H5 227 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 CBLN2Q8IUK8 224 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 GPR137CQ8N3F9 429 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 OR1S1Q8NH92 325 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 SLC6A15Q9H2J7 730 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 SLC2A8Q9NY64 477 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 GPR31O00270 319 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 GOSR2O14653 212 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 SORDQ00796 357 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 ECH1Q13011 328 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 OR10K1Q8NGX5 313 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 ABHD3Q8WU67 409 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 MRPS24Q96EL2 167 aaKnown RBP12.2□□□□□ -0.46
SNCA-204ENST00000394989 IFT22Q9H7X7 185 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 TMEM38BQ9NVV0 291 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 VSIG4Q9Y279 399 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 TRAV20A0A0B4J274 112 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 SYNGR3O43761 229 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 CELA3AP09093 270 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 PATE4P0C8F1 98 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 PRF1P14222 555 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 B4GALT1P15291 398 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 HRH1P35367 487 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 PDSS1Q5T2R2 415 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 KCNG3Q8TAE7 436 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 ADAMTS17Q8TE56 1095 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 PCDHGA1Q9Y5H4 931 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 A8MXK9 166 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 RAD51DO75771 328 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 SEC61A1P61619 476 aaKnown RBP12.2□□□□□ -0.46
SNCA-204ENST00000394989 ZNF774Q6NX45 483 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 PLXDC2Q6UX71 529 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 TNFAIP8L1Q8WVP5 186 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 SGK3Q96BR1 496 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 GPER1Q99527 375 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 MICU1Q9BPX6 476 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 TMEM59Q9BXS4 323 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 CHST5Q9GZS9 411 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 UPB1Q9UBR1 384 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 PIGLQ9Y2B2 252 aa12.2□□□□□ -0.46
SNCA-204ENST00000394989 DMXL1Q9Y485 3027 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 SCGNO76038 276 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 BAMBIQ13145 260 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 RNASE10Q5GAN6 216 aaKnown RBP12.19□□□□□ -0.46
SNCA-204ENST00000394989 AAED1Q7RTV5 226 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 FGFBP3Q8TAT2 258 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 SCARB1Q8WTV0 552 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 GPR87Q9BY21 358 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 EDARQ9UNE0 448 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 LOC100509620A0A075B734 347 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 KCNAB3O43448 404 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 SGCEO43556 437 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 MT-CO3P00414 261 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 CHRM2P08172 466 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 RD3LP0DJH9 198 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 LIPCP11150 499 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 ACKR3P25106 362 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 MPZP25189 248 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 THBS4P35443 961 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 PTGFRP43088 359 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 CXADRP78310 365 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 GK2Q14410 553 aaPredicted RBP12.19□□□□□ -0.46
SNCA-204ENST00000394989 MEF2DQ14814 521 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 LY6G6FQ5SQ64 297 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 DHRS13Q6UX07 377 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 OR2M7Q8NG81 312 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 CPT1CQ8TCG5 803 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 RAB3CQ96E17 227 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 CMSS1Q9BQ75 279 aaKnown RBP12.19□□□□□ -0.46
SNCA-204ENST00000394989 ESRP2Q9H6T0 727 aaKnown RBP12.19□□□□□ -0.46
SNCA-204ENST00000394989 ZNF703Q9H7S9 590 aaPredicted RBP12.19□□□□□ -0.46
SNCA-204ENST00000394989 FN3KRPQ9HA64 309 aa12.19□□□□□ -0.46
SNCA-204ENST00000394989 MYOZ1Q9NP98 299 aaPredicted RBP12.19□□□□□ -0.46
SNCA-204ENST00000394989 CYTIPO60759 359 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 CRTAPO75718 401 aaPredicted RBP12.18□□□□□ -0.46
SNCA-204ENST00000394989 CST2P09228 141 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 HIST1H1DP16402 221 aaKnown RBP12.18□□□□□ -0.46
SNCA-204ENST00000394989 C4BPBP20851 252 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 RAB35Q15286 201 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 DCAF10Q5QP82 559 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 OVCH2Q7RTZ1 564 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 TMEM185AQ8NFB2 350 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 SPTSSAQ969W0 71 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 TMPRSS13Q9BYE2 586 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 OR2AT4A6NND4 320 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 C21orf140B9A014 251 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 DISC1C4P0D8 188 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 STMND1H3BQB6 276 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 ZNF32P17041 273 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 AVPR2P30518 371 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 ALDH3B1P43353 468 aa12.18□□□□□ -0.46
SNCA-204ENST00000394989 KCNJ3P48549 501 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms