RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
USP49-203ENST00000394253 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
USP49-203ENST00000394253 RBFOX3A6NFN3 312 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 RBP4P02753 201 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 SNRPNP63162 240 aaKnown RBP12.17□□□□□ -0.46
USP49-203ENST00000394253 NHSL2Q5HYW2 709 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 ACER3Q9NUN7 267 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 IL20Q9NYY1 176 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 ROS1P08922 2347 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 KLRC4-KLRK1H3BQV0 150 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 MBPP02686 304 aaPredicted RBP12.17□□□□□ -0.46
USP49-203ENST00000394253 APOBEC1P41238 236 aaKnown RBP12.17□□□□□ -0.46
USP49-203ENST00000394253 JAG1P78504 1218 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 SLC16A13Q7RTY0 426 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 OR5M11Q96RB7 305 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 CSF3RQ99062 836 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 CDX1P47902 265 aaPredicted RBP12.17□□□□□ -0.46
USP49-203ENST00000394253 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 ZNF480Q8WV37 535 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 IGLV3-22A0A075B6J6 115 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 XRCC2O43543 280 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 DHRS3O75911 302 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 RAB9AP51151 201 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 PGGT1BP53609 377 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 YOD1Q5VVQ6 348 aaPredicted RBP12.17□□□□□ -0.46
USP49-203ENST00000394253 MAGT1Q9H0U3 335 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 RECKO95980 971 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 GZMKP49863 264 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 DGCR2P98153 550 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 IL10RAQ13651 578 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 OCIAD1Q9NX40 245 aa12.17□□□□□ -0.46
USP49-203ENST00000394253 NID1P14543 1247 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 ADRA1AP35348 466 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 LBX1P52954 281 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 OR2W3Q7Z3T1 314 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 DUSP18Q8NEJ0 188 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 TET1Q8NFU7 2136 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 OR5C1Q8NGR4 320 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 RPS4Y2Q8TD47 263 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 PELI1Q96FA3 418 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 MSL2Q9HCI7 577 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 FITM1A5D6W6 292 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 HIST1H1EP10412 219 aaKnown RBP12.16□□□□□ -0.46
USP49-203ENST00000394253 PNLIPRP2P54317 469 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 KTI12Q96EK9 354 aaPredicted RBP12.16□□□□□ -0.46
USP49-203ENST00000394253 TNFRSF13CQ96RJ3 184 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.16□□□□□ -0.46
USP49-203ENST00000394253 NTNG1Q9Y2I2 539 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 WNT3P56703 355 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 SHBQ15464 509 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 PMCHL1Q16048 86 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 SMIM4Q8WVI0 70 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 CLDN23Q96B33 292 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 P2RY12Q9H244 342 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 NAV3Q8IVL0 2385 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 CTF1Q16619 201 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 ZDHHC23Q8IYP9 409 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.16□□□□□ -0.46
USP49-203ENST00000394253 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 GPANK1O95872 356 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 DCDP81605 110 aaKnown RBP12.16□□□□□ -0.46
USP49-203ENST00000394253 MED25Q71SY5 747 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 ZIC5Q96T25 663 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 OR51B4Q9Y5P0 310 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 PIGAP37287 484 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 LRRC10Q5BKY1 277 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 OR1L6Q8NGR2 347 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 TMEM40Q8WWA1 233 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 CLEC2DQ9UHP7 191 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 MNX1P50219 401 aaPredicted RBP12.16□□□□□ -0.46
USP49-203ENST00000394253 PAQR6Q6TCH4 344 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 OR4B1Q8NGF8 309 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 RAXQ9Y2V3 346 aa12.16□□□□□ -0.46
USP49-203ENST00000394253 ACACAQ13085 2346 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 TGIF2-C20orf24A0A0A6YYL0 155 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 WNT7AO00755 349 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 SHISA6Q6ZSJ9 500 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 GDF7Q7Z4P5 450 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 MUC4Q99102 2169 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 TMED7-TICAM2A0A0A6YYA0 188 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 PPP1CCP36873 323 aaKnown RBP12.15□□□□□ -0.46
USP49-203ENST00000394253 TAZQ16635 292 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 C19orf54Q5BKX5 351 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 ZNF542PQ5EBM4 170 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 ZNF687Q8N1G0 1237 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 OR5R1Q8NH85 324 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 TMED7Q9Y3B3 224 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 TRAV1-2A0A0B4J238 106 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 C11orf94C9JXX5 98 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 ZNF195O14628 629 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 SMPD2O60906 423 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 CLN3Q13286 438 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 GPNMBQ14956 572 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 C18orf21Q32NC0 220 aaPredicted RBP12.15□□□□□ -0.46
USP49-203ENST00000394253 KHDC3LQ587J8 217 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 TMEM81Q6P7N7 255 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 MARCH1Q8TCQ1 289 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 EGLN2Q96KS0 407 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms