RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 SLC22A8Q8TCC7 542 aa12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 SSC4DQ8WTU2 575 aa12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 SPACA9Q96E40 222 aaPredicted RBP12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 SPSB2Q99619 263 aa12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 RBM24Q9BX46 236 aaKnown RBP12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 SMIM3Q9BZL3 60 aa12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 MMP26Q9NRE1 261 aa12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 LPAR3Q9UBY5 353 aa12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 RARRES3Q9UL19 164 aa12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 PIGLQ9Y2B2 252 aa12.24□□□□□ -0.45
GAPVD1-205ENST00000394084 ADAMTS20P59510 1910 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 AQP7P3A6NL99 342 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 NDUFA2O43678 99 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 FBXO24O75426 580 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 CSTBP04080 98 aaKnown RBP12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 NFYBP25208 207 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 CBX5P45973 191 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 CSNK1A1P48729 337 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 TAS2R46P59540 309 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 PJVKQ0ZLH3 352 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 ECH1Q13011 328 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 CHAF1BQ13112 559 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 HFEQ30201 348 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 OR10Z1Q8NGY1 313 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 NECAB3Q96P71 396 aaPredicted RBP12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 ZNF385AQ96PM9 386 aaKnown RBP12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 SLC5A7Q9GZV3 580 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 UQCC1Q9NVA1 299 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 PMS2P1A4D2B8 440 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 TLX3O43711 291 aaPredicted RBP12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 MED6O75586 246 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 ID4P47928 161 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 HIST3H3Q16695 136 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 IAH1Q2TAA2 248 aaPredicted RBP12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 SPAG16Q8N0X2 631 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 FAM89BQ8N5H3 189 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 AQP10Q96PS8 301 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 ZNF2Q9BSG1 426 aaPredicted RBP12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 RHOFQ9HBH0 211 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 MCTS1Q9ULC4 181 aaKnown RBP12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 C14orf166Q9Y224 244 aaKnown RBP12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 CEP192Q8TEP8 1941 aa12.23□□□□□ -0.45
GAPVD1-205ENST00000394084 PRF1P14222 555 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 MUC1P15941 1255 aaPredicted RBP12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 MSR1P21757 451 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 AKIRIN2Q53H80 203 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 LINC00518Q8N0U6 118 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 JSRP1Q96MG2 331 aaPredicted RBP12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 UCN2Q96RP3 112 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 PARP12Q9H0J9 701 aaKnown RBP12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 NDRG3Q9UGV2 375 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 IGLV3-32A0A0A0MS00 114 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 A0A1W2PQM1 296 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 DHRS7CA6NNS2 312 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 ANGPTL7O43827 346 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 SCGB1D2O95969 90 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 RBMXP38159 391 aaKnown RBP12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 LPAR6P43657 344 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 CCL7P80098 99 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 SHBQ15464 509 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 CLEC9AQ6UXN8 241 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 SEMA6DQ8NFY4 1073 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 TAF9BQ9HBM6 251 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 FSCN3Q9NQT6 498 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 GPR173Q9NS66 373 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 ZNF581Q9P0T4 197 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 WDFY3Q8IZQ1 3526 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 SLC35A1P78382 337 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 RBM39Q14498 530 aaKnown RBP12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 KCNMB1Q16558 191 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 ADAMTS17Q8TE56 1095 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 EMG1Q92979 244 aaKnown RBP12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 GNRHR2Q96P88 292 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 PLEKHJ1Q9NW61 149 aa12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 LSM5Q9Y4Y9 91 aaKnown RBP12.22□□□□□ -0.45
GAPVD1-205ENST00000394084 FOXI3A8MTJ6 420 aaPredicted RBP12.21□□□□□ -0.45
GAPVD1-205ENST00000394084 DHRS3O75911 302 aa12.21□□□□□ -0.45
GAPVD1-205ENST00000394084 LYL1P12980 280 aa12.21□□□□□ -0.45
GAPVD1-205ENST00000394084 ENDOGQ14249 297 aaKnown RBP12.21□□□□□ -0.45
GAPVD1-205ENST00000394084 FAM189A2Q15884 450 aa12.21□□□□□ -0.45
GAPVD1-205ENST00000394084 OR2AE1Q8NHA4 323 aa12.21□□□□□ -0.45
GAPVD1-205ENST00000394084 PLEK2Q9NYT0 353 aa12.21□□□□□ -0.45
GAPVD1-205ENST00000394084 HDGFL3Q9Y3E1 203 aa12.21□□□□□ -0.45
GAPVD1-205ENST00000394084 IFNA2P01563 188 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 TMEM225BP0DP42 221 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 HKR1P10072 659 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 NAT2P11245 290 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 PNLIPP16233 465 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 ZNF708P17019 499 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 THBS4P35443 961 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 RRADP55042 308 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 STK11Q15831 433 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 RSPO1Q2MKA7 263 aaPredicted RBP12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 RAET1LQ5VY80 246 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 GJC3Q8NFK1 279 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 ZNF837Q96EG3 531 aaPredicted RBP12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 PIGQQ9BRB3 760 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 PCED1AQ9H1Q7 454 aa12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 CARHSP1Q9Y2V2 147 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms