RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 Q8N7P7 452 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 OR51A7Q8NH64 312 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 TMEM255BQ8WV15 326 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 TNFRSF14Q92956 283 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 MYDGFQ969H8 173 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 MALSU1Q96EH3 234 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 ZNF570Q96NI8 536 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 CCDC134Q9H6E4 229 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 C20orf141Q9NUB4 165 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 THAP1Q9NVV9 213 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 RIMS3Q9UJD0 308 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 TCF19Q9Y242 345 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 SH3GLB1Q9Y371 365 aa6.33□□□□□ -1.4
CASP4-201ENST00000393150 STAB2Q8WWQ8 2551 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 VGLL3A8MV65 326 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 EFCAB9A8MZ26 197 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 H7C1C5 153 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 CHST1O43916 411 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 PTBP3O95758 552 aaKnown RBP6.32□□□□□ -1.4
CASP4-201ENST00000393150 LHBP01229 141 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 HLA-DQA2P01906 255 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 GPX2P18283 190 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 CHATP28329 748 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 GABRA2P47869 451 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 CAV3P56539 151 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 LCN6P62502 163 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 IL5RAQ01344 420 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 SPIBQ01892 262 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 TAF13Q15543 124 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 PCK2Q16822 640 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 PLA1AQ53H76 456 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 ATPAF1Q5TC12 328 aaPredicted RBP6.32□□□□□ -1.4
CASP4-201ENST00000393150 GPR139Q6DWJ6 353 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 ZNF826PQ6ZT77 177 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 CCDC80Q76M96 950 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 C16orf82Q7Z2V1 217 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 TSEN54Q7Z6J9 526 aaKnown RBP6.32□□□□□ -1.4
CASP4-201ENST00000393150 DHDDSQ86SQ9 333 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 TMEM219Q86XT9 240 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 GCSAMQ8N6F7 178 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 FAM216BQ8N7L0 139 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 OR52H1Q8NGJ2 320 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 DYDC1Q8WWB3 177 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 STMN2Q93045 179 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 RCHY1Q96PM5 261 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 ATF6BQ99941 703 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 MICU1Q9BPX6 476 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 TINAGL1Q9GZM7 467 aaPredicted RBP6.32□□□□□ -1.4
CASP4-201ENST00000393150 SP140LQ9H930 580 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 KCNK9Q9NPC2 374 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 INTS9Q9NV88 658 aaKnown RBP6.32□□□□□ -1.4
CASP4-201ENST00000393150 HAO2Q9NYQ3 351 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 HAO1Q9UJM8 370 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 ZNF391Q9UJN7 358 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 A4GNTQ9UNA3 340 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 NDUFAF1Q9Y375 327 aa6.32□□□□□ -1.4
CASP4-201ENST00000393150 ACOT8O14734 319 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 ELANEP08246 267 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 CD14P08571 375 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 TSPAN19P0C672 248 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 CTLA4P16410 223 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 COX7A1P24310 79 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 MYCNOSP40205 109 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 RAB25P57735 213 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 GMFBP60983 142 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 IL18R1Q13478 541 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 CRIP3Q6Q6R5 217 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 ADCK1Q86TW2 530 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 RBM45Q8IUH3 476 aaKnown RBP6.31□□□□□ -1.4
CASP4-201ENST00000393150 NKAIN4Q8IVV8 208 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 CYB561A3Q8NBI2 242 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 OR13D1Q8NGV5 346 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 ISOC1Q96CN7 298 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 SPDL1Q96EA4 605 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 HIST1H2AAQ96QV6 131 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 SORT1Q99523 831 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 ELAC2Q9BQ52 826 aaKnown RBP6.31□□□□□ -1.4
CASP4-201ENST00000393150 PRSS27Q9BQR3 290 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 WFDC6Q9BQY6 131 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 RABEP2Q9H5N1 569 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 NMNAT1Q9HAN9 279 aaPredicted RBP6.31□□□□□ -1.4
CASP4-201ENST00000393150 KRCC1Q9NPI7 259 aaPredicted RBP6.31□□□□□ -1.4
CASP4-201ENST00000393150 TBL2Q9Y4P3 447 aaKnown RBP6.31□□□□□ -1.4
CASP4-201ENST00000393150 LRP12Q9Y561 859 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 SMAD5-AS1Q9Y6J3 95 aa6.31□□□□□ -1.4
CASP4-201ENST00000393150 EPPK1P58107 5090 aaKnown RBP6.31□□□□□ -1.4
CASP4-201ENST00000393150 TRAV27A0A087WT01 109 aa6.3□□□□□ -1.4
CASP4-201ENST00000393150 A6NDX4 124 aa6.3□□□□□ -1.4
CASP4-201ENST00000393150 ANKRD65E5RJM6 399 aa6.3□□□□□ -1.4
CASP4-201ENST00000393150 M0R135 149 aa6.3□□□□□ -1.4
CASP4-201ENST00000393150 LYPD3O95274 346 aa6.3□□□□□ -1.4
CASP4-201ENST00000393150 RENP00797 406 aa6.3□□□□□ -1.4
CASP4-201ENST00000393150 ARG1P05089 322 aa6.3□□□□□ -1.4
CASP4-201ENST00000393150 ACSM4P0C7M7 580 aa6.3□□□□□ -1.4
CASP4-201ENST00000393150 TROVE2P10155 538 aaKnown RBP eCLIP6.3□□□□□ -1.4
CASP4-201ENST00000393150 ZNF823P16415 610 aa6.3□□□□□ -1.4
CASP4-201ENST00000393150 CFL1P23528 166 aaKnown RBP6.3□□□□□ -1.4
CASP4-201ENST00000393150 RPS6KA3P51812 740 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms