RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TECTBQ96PL2 329 aa11.76□□□□□ -0.53
LCA5-202ENST00000392959 NMES1Q9C002 83 aa11.76□□□□□ -0.53
LCA5-202ENST00000392959 TOGARAM1Q9Y4F4 1720 aa11.76□□□□□ -0.53
LCA5-202ENST00000392959 SFT2D2O95562 160 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 RTL8BQ17RB0 113 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 Q7L0L9 218 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 ZNF547Q8IVP9 402 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 ZC3HAV1LQ96H79 300 aaKnown RBP11.75□□□□□ -0.53
LCA5-202ENST00000392959 LRRC61Q9BV99 259 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 WSB1Q9Y6I7 421 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 HMSDA8MTL9 139 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 SRFP11831 508 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 ERHP84090 104 aaKnown RBP11.75□□□□□ -0.53
LCA5-202ENST00000392959 ZNF718Q3SXZ3 478 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 LILRA6Q6PI73 481 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 ADPRHL1Q8NDY3 354 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 APOBEC3DQ96AK3 386 aaPredicted RBP11.75□□□□□ -0.53
LCA5-202ENST00000392959 SARAFQ96BY9 339 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 NARFLQ9H6Q4 476 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 ANKRD20A5PA0PJZ0 165 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 CSN1S1P47710 185 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 RAB13P51153 203 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 PPIAP62937 165 aaKnown RBP11.75□□□□□ -0.53
LCA5-202ENST00000392959 RAB32Q13637 225 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 DMKNQ6E0U4 476 aaPredicted RBP11.75□□□□□ -0.53
LCA5-202ENST00000392959 VN1R4Q7Z5H5 301 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 PHYHIPLQ96FC7 376 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 ADGRG7Q96K78 797 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 CACFD1Q9UGQ2 172 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 C9orf170A2RU37 121 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 YIF1AO95070 293 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 SULT1A3P0DMM9 295 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 SULT1A4P0DMN0 295 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 RFC3P40938 356 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 ZNF429Q86V71 674 aa11.75□□□□□ -0.53
LCA5-202ENST00000392959 METTL12A8MUP2 240 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 SHISA8B8ZZ34 492 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 RER1O15258 196 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 DUS4LO95620 317 aaKnown RBP11.74□□□□□ -0.53
LCA5-202ENST00000392959 GPANK1O95872 356 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 GLULP15104 373 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 GABRG2P18507 467 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 ZBTB25P24278 435 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 PTGFRP43088 359 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 TMEM215Q68D42 235 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 ABI3BPQ7Z7G0 1075 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.74□□□□□ -0.53
LCA5-202ENST00000392959 GALMQ96C23 342 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 NTNG2Q96CW9 530 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 MMP24Q9Y5R2 645 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 IL2RAP01589 272 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 PGA3P0DJD8 388 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 GPR3P46089 330 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 DSCR4P56555 118 aaPredicted RBP11.74□□□□□ -0.53
LCA5-202ENST00000392959 TSPAN32Q96QS1 320 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 FAM103A1Q9BTL3 118 aaKnown RBP11.74□□□□□ -0.53
LCA5-202ENST00000392959 V9GYH0 126 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 CCDC187A0A096LP49 1063 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 CD160O95971 181 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 FGF7P21781 194 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 TAAR6Q96RI8 345 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 RASL12Q9NYN1 266 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 CCL27Q9Y4X3 112 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 ALG1L2C9J202 215 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
LCA5-202ENST00000392959 PWWP2BQ6NUJ5 590 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 OR10X1Q8NGY0 326 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 EDEM2Q9BV94 578 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 IFT22Q9H7X7 185 aa11.74□□□□□ -0.53
LCA5-202ENST00000392959 ZNF230Q9UIE0 474 aaPredicted RBP11.74□□□□□ -0.53
LCA5-202ENST00000392959 FFAR1O14842 300 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 KRASP01116 189 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 SEMG1P04279 462 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 FUT7Q11130 342 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 RPL7L1Q6DKI1 246 aaKnown RBP11.73□□□□□ -0.53
LCA5-202ENST00000392959 ZNF275Q9NSD4 429 aaPredicted RBP11.73□□□□□ -0.53
LCA5-202ENST00000392959 CISD3P0C7P0 127 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 CTLA4P16410 223 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 FAM162BQ5T6X4 162 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 PRSS54Q6PEW0 395 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 CBLN3Q6UW01 205 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 TMEM104Q8NE00 496 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 ZNF764Q96H86 408 aaPredicted RBP11.73□□□□□ -0.53
LCA5-202ENST00000392959 CCDC74BQ96LY2 380 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 VN1R1Q9GZP7 353 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 DHRS3O75911 302 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 NOVA1P51513 510 aaKnown RBP11.73□□□□□ -0.53
LCA5-202ENST00000392959 RAB35Q15286 201 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 HSD17B13Q7Z5P4 300 aaPredicted RBP11.73□□□□□ -0.53
LCA5-202ENST00000392959 ETFBKMTQ8IXQ9 262 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 CPEB3Q8NE35 698 aaKnown RBP11.73□□□□□ -0.53
LCA5-202ENST00000392959 OR10G3Q8NGC4 313 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 MRPS24Q96EL2 167 aaKnown RBP11.73□□□□□ -0.53
LCA5-202ENST00000392959 CLCF1Q9UBD9 225 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 ASXL3Q9C0F0 2248 aa11.73□□□□□ -0.53
LCA5-202ENST00000392959 UBE2L5PA0A1B0GUS4 154 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 SEC14L6B5MCN3 397 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 GPM6AP51674 278 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 TIAL1Q01085 375 aaKnown RBP eCLIP11.72□□□□□ -0.53
LCA5-202ENST00000392959 ZNF816Q0VGE8 651 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms