RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 HPS1Q92902 700 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 URM1Q9BTM9 101 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 STARD10Q9Y365 291 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 A0A0A6YYD4 124 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 ICMTO60725 284 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 CRTAPO75718 401 aaPredicted RBP9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 NGFP01138 241 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 HOXD4P09016 255 aaPredicted RBP9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 HLA-DMAP28067 261 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 FAUP35544 74 aaKnown RBP9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 TIMP3P35625 211 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 VEGFCP49767 419 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 TDGF1P3P51864 188 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 FUT6P51993 359 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 RPS27AP62979 156 aaKnown RBP9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 Q6ZTK2 550 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 OR56B2PQ8NGI1 322 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 OR5L1Q8NGL2 311 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 BORCS8Q96FH0 119 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 S100A13Q99584 98 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 NICN1Q9BSH3 213 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 NUDT15Q9NV35 164 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 ZNF107Q9UII5 783 aaPredicted RBP9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 ING4Q9UNL4 249 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 SLC7A11Q9UPY5 501 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 IGKV1-27A0A075B6S5 117 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 A0A1W2PP11 408 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 FAM230AA0A1W2PPH8 454 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 TMEM235A6NFC5 223 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 CCR6P51684 374 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 RAG2P55895 527 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 CD300CQ08708 224 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 P2RY6Q15077 328 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 TMEM255AQ5JRV8 349 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 BTN2A1Q7KYR7 527 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 C17orf78Q8N4C9 275 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 FAM89BQ8N5H3 189 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 CSNK2A3Q8NEV1 391 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 OR56B1Q8NGI3 324 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 PIGCQ92535 297 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 CMBLQ96DG6 245 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 BANF2Q9H503 90 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 ZMAT3Q9HA38 289 aaKnown RBP9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 PTTG3PQ9NZH4 202 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 DMXL2Q8TDJ6 3036 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 CEP295Q9C0D2 2601 aa9.88□□□□□ -0.83
SMARCAL1-203ENST00000392128 CST4P01036 141 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 IL2RAP01589 272 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 GSTT2P0CG29 244 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 MGMTP16455 207 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 HOXC12P31275 282 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 ATP1B3P54709 279 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 MRPL49Q13405 166 aaKnown RBP9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 HLXQ14774 488 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 CDNFQ49AH0 187 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 PLCXD3Q63HM9 321 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 ASCL4Q6XD76 172 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 BEND4Q6ZU67 534 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 MOB3CQ70IA8 216 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 FTMTQ8N4E7 242 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 ZNF610Q8N9Z0 462 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 CHST4Q8NCG5 386 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 STEAP2Q8NFT2 490 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 RNF170Q96K19 258 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 TM2D1Q9BX74 207 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 ZNF71Q9NQZ8 489 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 ALG5Q9Y673 324 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 MEIS3P1A6NDR6 274 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 HMX3A6NHT5 357 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 DHFRP00374 187 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 GSTP1P09211 210 aaKnown RBP9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 AKAIN1P0CW23 69 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 TMEM225BP0DP42 221 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 CBR1P16152 277 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 TAS2R19P59542 299 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 RFPL4BQ6ZWI9 263 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 MYPOPQ86VE0 399 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 WDR31Q8NA23 367 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 TMEM229BQ8NBD8 167 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 NAXEQ8NCW5 288 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 SUN5Q8TC36 379 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 WBP1Q96G27 269 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 SELENOIQ9C0D9 397 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 ACTR6Q9GZN1 396 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 OPN3Q9H1Y3 402 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 POFUT1Q9H488 388 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 OBP2BQ9NPH6 170 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 ELF5Q9UKW6 265 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 RAXQ9Y2V3 346 aa9.87□□□□□ -0.83
SMARCAL1-203ENST00000392128 PTPRQQ9UMZ3 2332 aa9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 TRAV6A0A075B6T7 132 aa9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 A0A1W2PR80 420 aa9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 ZNF850A8MQ14 1090 aa9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 FOXI3A8MTJ6 420 aaPredicted RBP9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 IGKV3-15P01624 115 aa9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 CELA3BP08861 270 aa9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 GTF2F2P13984 249 aa9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 GNB3P16520 340 aa9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 PSMB1P20618 241 aaKnown RBP9.86□□□□□ -0.83
SMARCAL1-203ENST00000392128 SERPINA2P20848 420 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms