RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 RNF133Q8WVZ7 376 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 ACER3Q9NUN7 267 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 TMED7Q9Y3B3 224 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 COL2A1P02458 1487 aaPredicted RBP9.75□□□□□ -0.85
CLCN4-202ENST00000380833 C5orf49A4QMS7 147 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 J3KRW8 73 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 GAB4Q2WGN9 574 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 HTR3DQ70Z44 454 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 ZNF480Q8WV37 535 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 ACY3Q96HD9 319 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 NMNAT3Q96T66 252 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 ACPTQ9BZG2 426 aa9.75□□□□□ -0.85
CLCN4-202ENST00000380833 GOSR1O95249 250 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 SLC25A6P12236 298 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 CATR1Q13166 79 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 OR51A2Q8NGJ7 313 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 UBL7Q96S82 380 aaPredicted RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 UBE2ZQ9H832 354 aaPredicted RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 HINT3Q9NQE9 182 aaKnown RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 FBXO4Q9UKT5 387 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 KCNAB3O43448 404 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 GALNSP34059 522 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 PRTGQ2VWP7 1150 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 ELFN2Q5R3F8 820 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 PRAMEF5Q5TYX0 476 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 PRAMEF6Q5VXH4 476 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 MENTQ9BUN1 341 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 MYH8P13535 1937 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 SSSCA1O60232 199 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 NUTF2P61970 127 aaKnown RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 CLN3Q13286 438 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 GUCA2BQ16661 112 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 Q56UQ5 140 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 ISCA2Q86U28 154 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 PUSL1Q8N0Z8 303 aaKnown RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 P4HTMQ9NXG6 502 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 WSB2Q9NYS7 404 aaPredicted RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 OR2T7P0C7T2 308 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 MFAP5Q13361 173 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 SIX1Q15475 284 aaPredicted RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 FBLN7Q53RD9 439 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 FAAP20Q6NZ36 180 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 TNFRSF13CQ96RJ3 184 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 EGLN1Q9GZT9 426 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 GABARAPL1Q9H0R8 117 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 TMEM238LA0A1B0GVL6 79 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 A6NJY4 79 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 ATXN7O15265 892 aaPredicted RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 GYPAP02724 150 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 FAM87AP0C7U9 286 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 IL3RAP26951 378 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 ZNF85Q03923 595 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 LINC00303Q3SY05 128 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 MRGPRX4Q96LA9 322 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 HSPB9Q9BQS6 159 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 LMF2Q9BU23 707 aaKnown RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 PLEKHF2Q9H8W4 249 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 LOXL2Q9Y4K0 774 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 OR2W5A6NFC9 320 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 DLEU1O43261 78 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 SDC1P18827 310 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 HOXD9P28356 352 aaPredicted RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 CD1BP29016 333 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 ZNF140P52738 457 aaPredicted RBP9.74□□□□□ -0.85
CLCN4-202ENST00000380833 TAS2R45P59539 299 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 HERPUD1Q15011 391 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 KCNG3Q8TAE7 436 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 SMIM4Q8WVI0 70 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 ZDHHC8Q9ULC8 765 aa9.74□□□□□ -0.85
CLCN4-202ENST00000380833 K7ESM1 405 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 FOXE1O00358 373 aaPredicted RBP9.73□□□□□ -0.85
CLCN4-202ENST00000380833 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.73□□□□□ -0.85
CLCN4-202ENST00000380833 PLPPR5Q32ZL2 321 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 LDLRAD2Q5SZI1 272 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 LHFPL4Q7Z7J7 247 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 PLPP7Q8NBV4 271 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 UBALD1Q8TB05 177 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 PMCHL2Q9BQD1 86 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 ADAT1Q9BUB4 502 aaKnown RBP9.73□□□□□ -0.85
CLCN4-202ENST00000380833 MRPS28Q9Y2Q9 187 aaKnown RBP9.73□□□□□ -0.85
CLCN4-202ENST00000380833 SLC5A10A0PJK1 596 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 RNASET2O00584 256 aaKnown RBP9.73□□□□□ -0.85
CLCN4-202ENST00000380833 VAMP5O95183 116 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 SLC25A4P12235 298 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 BSXQ3C1V8 233 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 ZC3H3Q8IXZ2 948 aaKnown RBP9.73□□□□□ -0.85
CLCN4-202ENST00000380833 RAB33BQ9H082 229 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 LPAR2Q9HBW0 351 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 PROCRQ9UNN8 238 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 MRPS21P82921 87 aaKnown RBP9.73□□□□□ -0.85
CLCN4-202ENST00000380833 SMAGPQ0VAQ4 97 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 OR1L6Q8NGR2 347 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 PRSS3P2Q8NHM4 247 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 NXPE3Q969Y0 559 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 SEH1LQ96EE3 360 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 AHDC1Q5TGY3 1603 aaPredicted RBP9.73□□□□□ -0.85
CLCN4-202ENST00000380833 PYCARD-AS1I3L0S3 204 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 B4GALT3O60512 393 aa9.73□□□□□ -0.85
CLCN4-202ENST00000380833 GALR3O60755 368 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms