RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 RTL8AQ9BWD3 113 aa15.91■□□□□ 0.14
SMN2-202ENST00000380742 GSX2Q9BZM3 304 aa15.91■□□□□ 0.14
SMN2-202ENST00000380742 EGLN1Q9GZT9 426 aa15.91■□□□□ 0.14
SMN2-202ENST00000380742 SAP30LQ9HAJ7 183 aa15.91■□□□□ 0.14
SMN2-202ENST00000380742 BEX4Q9NWD9 120 aaPredicted RBP15.91■□□□□ 0.14
SMN2-202ENST00000380742 TRAV8-7A0A075B6U6 113 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 TRDV1A0A1B0GX56 115 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 ZNF732B4DXR9 585 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 GPX5O75715 221 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 PTBP3O95758 552 aaKnown RBP15.9■□□□□ 0.14
SMN2-202ENST00000380742 UCHL1P09936 223 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 GADD45AP24522 165 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 MAPK3P27361 379 aaPredicted RBP15.9■□□□□ 0.14
SMN2-202ENST00000380742 RBMXP38159 391 aaKnown RBP15.9■□□□□ 0.14
SMN2-202ENST00000380742 GPM6AP51674 278 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 EFNA4P52798 201 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 MPPED2Q15777 294 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 TGIF2LYQ8IUE0 185 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 CELF2-AS1Q8N7Q2 184 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 OR1M1Q8NGA1 313 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 OR51A2Q8NGJ7 313 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 OR13F1Q8NGS4 319 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 PERPQ96FX8 193 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 TECTBQ96PL2 329 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 OR51E2Q9H255 320 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 C14orf119Q9NWQ9 140 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 SCOCQ9UIL1 159 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 STUB1Q9UNE7 303 aa15.9■□□□□ 0.14
SMN2-202ENST00000380742 PQLC2LA1A4F0 135 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 SULT1B1O43704 296 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 ALX3O95076 343 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 GRPP07492 148 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 TNFRSF1AP19438 455 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 FSTP19883 344 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 AZGP1P25311 298 aaKnown RBP15.89■□□□□ 0.13
SMN2-202ENST00000380742 ATP5J2P56134 94 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 GNG3P63215 75 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 MZT1Q08AG7 82 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 CNN3Q15417 329 aaKnown RBP15.89■□□□□ 0.13
SMN2-202ENST00000380742 FAM76BQ5HYJ3 339 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 RNF144BQ7Z419 303 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 GCM1Q9NP62 436 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 TREM2Q9NZC2 230 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 FOXJ3Q9UPW0 622 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 SLC7A11Q9UPY5 501 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 CACNG2Q9Y698 323 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 ARID1AO14497 2285 aa15.89■□□□□ 0.13
SMN2-202ENST00000380742 FLNBO75369 2602 aaKnown RBP15.89■□□□□ 0.13
SMN2-202ENST00000380742 IGKV1-27A0A075B6S5 117 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 FAM230AA0A1W2PPH8 454 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 OR5B21A6NL26 309 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 TMEM210A6NLX4 147 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 LYNX1G3V0Z9 82 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 CDC14BO60729 498 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 LYNX1P0DP58 116 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 DAOP14920 347 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 RAB3AP20336 220 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 GALP22466 123 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 COL8A2P25067 703 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 PMELP40967 661 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 GATA4P43694 442 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 FUT6P51993 359 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 ZNF154Q13106 437 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 MOGAT3Q86VF5 341 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 C11orf53Q8IXP5 236 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 ZNF420Q8TAQ5 688 aaPredicted RBP15.88■□□□□ 0.13
SMN2-202ENST00000380742 PHYHIPQ92561 330 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 YIPF5Q969M3 257 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 SPSB1Q96BD6 273 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 OR51I2Q9H344 312 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 UFSP2Q9NUQ7 469 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 VPS13CQ709C8 3753 aa15.88■□□□□ 0.13
SMN2-202ENST00000380742 IGHV1-69-2A0A0G2JMI3 117 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 SSX4O60224 188 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 PRKACBP22694 351 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 FGF9P31371 208 aaPredicted RBP15.87■□□□□ 0.13
SMN2-202ENST00000380742 RPL5P46777 297 aaKnown RBP15.87■□□□□ 0.13
SMN2-202ENST00000380742 HSD17B12Q53GQ0 312 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 CRIP3Q6Q6R5 217 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 DNAAF1Q8NEP3 725 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 RPL3LQ92901 407 aaKnown RBP15.87■□□□□ 0.13
SMN2-202ENST00000380742 BORCS8Q96FH0 119 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 SPACA5Q96QH8 159 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 CHCHD6Q9BRQ6 235 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 TLNRD1Q9H1K6 362 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 EXOSC4Q9NPD3 245 aaKnown RBP15.87■□□□□ 0.13
SMN2-202ENST00000380742 TXNL4BQ9NX01 149 aaKnown RBP15.87■□□□□ 0.13
SMN2-202ENST00000380742 CKLFQ9UBR5 152 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 PPP1R3CQ9UQK1 317 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 HCKP08631 526 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 SRMP19623 302 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 CALRP27797 417 aaKnown RBP15.87■□□□□ 0.13
SMN2-202ENST00000380742 RBP2P50120 134 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 PPP3R1P63098 170 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 C22orf42Q6IC83 251 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 ZNF826PQ6ZT77 177 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 CALHM1Q8IU99 346 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 LRRC75A-AS1Q8N1F1 130 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 SCCPDHQ8NBX0 429 aa15.87■□□□□ 0.13
SMN2-202ENST00000380742 OR52N4Q8NGI2 321 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms