RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 NTF3P20783 257 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 OR1C1Q15619 314 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 FAM162BQ5T6X4 162 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 SLC16A12Q6ZSM3 486 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 ZNF547Q8IVP9 402 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 CARFQ8N187 725 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 IGHV1OR21-1A0A087WYE8 117 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 DHRS3O75911 302 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 CPN1P15169 458 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 RPL7L1Q6DKI1 246 aaKnown RBP14.36□□□□□ -0.11
COL2A1-202ENST00000380518 DOK1Q99704 481 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 CHRDL1Q9BU40 450 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 C12orf10Q9HB07 376 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 RER1O15258 196 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 ZNF574Q6ZN55 896 aaPredicted RBP14.36□□□□□ -0.11
COL2A1-202ENST00000380518 MOB1BQ7L9L4 216 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 UBAC2Q8NBM4 344 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 HMGCLL1Q8TB92 370 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 ADGRG7Q96K78 797 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 TMED3Q9Y3Q3 217 aa14.36□□□□□ -0.11
COL2A1-202ENST00000380518 MYO5AQ9Y4I1 1855 aaKnown RBP14.35□□□□□ -0.11
COL2A1-202ENST00000380518 XKRY2A2RUG3 117 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 MASP2O00187 686 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 CYC1P08574 325 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 PTHLHP12272 177 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 ZNF141Q15928 474 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 TMEM88Q6PEY1 159 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 TRAV17A0A0B4J275 112 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 FGF7P21781 194 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 ARHGAP5-AS1Q96IT6 56 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 CXorf58Q96LI9 332 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 GNRHR2Q96P88 292 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 P4HTMQ9NXG6 502 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 OR5V1Q9UGF6 321 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 CST4P01036 141 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 PTGFRP43088 359 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 ZNF816Q0VGE8 651 aaPredicted RBP14.35□□□□□ -0.11
COL2A1-202ENST00000380518 FABP9Q0Z7S8 132 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 UQCC3Q6UW78 93 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 ZNF764Q96H86 408 aaPredicted RBP14.35□□□□□ -0.11
COL2A1-202ENST00000380518 COX14Q96I36 57 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 TSPAN32Q96QS1 320 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 SEC14L6B5MCN3 397 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 PRSS44E7EML9 344 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 CYTIPO60759 359 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 AKR1C3P42330 323 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 PRDX4Q13162 271 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 THSD4Q6ZMP0 1018 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 ZNF768Q9H5H4 540 aaKnown RBP14.35□□□□□ -0.11
COL2A1-202ENST00000380518 OCIAD1Q9NX40 245 aa14.35□□□□□ -0.11
COL2A1-202ENST00000380518 TPRP12270 2363 aaKnown RBP14.34□□□□□ -0.11
COL2A1-202ENST00000380518 TMEM272A0A1B0GTI8 110 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 A0A1W2PPQ1 181 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 ST8SIA5O15466 376 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 PGA3P0DJD8 388 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 CDKN2AP42771 156 aaKnown RBP14.34□□□□□ -0.11
COL2A1-202ENST00000380518 EIF3IQ13347 325 aaKnown RBP14.34□□□□□ -0.11
COL2A1-202ENST00000380518 CLDN23Q96B33 292 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 RAB18Q9NP72 206 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 SIRT3Q9NTG7 399 aaPredicted RBP14.34□□□□□ -0.11
COL2A1-202ENST00000380518 GAR1Q9NY12 217 aaKnown RBP14.34□□□□□ -0.11
COL2A1-202ENST00000380518 TNFRSF1AP19438 455 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 HNF1AP20823 631 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 CD96P40200 585 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 DHRS2Q13268 280 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 INSL4Q14641 139 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 RNPS1Q15287 305 aaKnown RBP14.34□□□□□ -0.11
COL2A1-202ENST00000380518 SP6Q3SY56 376 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 GUSBP11Q6P575 273 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 OIT3Q8WWZ8 545 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 FBXO34Q9NWN3 711 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 TRGV8A0A0C4DH27 118 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 CTAG2O75638 210 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 HPP00738 406 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 SPP1P10451 314 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 DRD3P35462 400 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 SIGLECL1Q8N7X8 197 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 TMEM18Q96B42 140 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 RPP25Q9BUL9 199 aaKnown RBP14.34□□□□□ -0.11
COL2A1-202ENST00000380518 SHROOM3Q8TF72 1996 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 FBP1P09467 338 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 KCNJ3P48549 501 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 POM121L2Q96KW2 1035 aa14.34□□□□□ -0.11
COL2A1-202ENST00000380518 ADAT1Q9BUB4 502 aaKnown RBP14.34□□□□□ -0.11
COL2A1-202ENST00000380518 ARID1AO14497 2285 aa14.33□□□□□ -0.11
COL2A1-202ENST00000380518 PRSS23O95084 383 aa14.33□□□□□ -0.11
COL2A1-202ENST00000380518 CRYABP02511 175 aaKnown RBP14.33□□□□□ -0.11
COL2A1-202ENST00000380518 HTRA4P83105 476 aaPredicted RBP14.33□□□□□ -0.11
COL2A1-202ENST00000380518 ZIC1Q15915 447 aa14.33□□□□□ -0.11
COL2A1-202ENST00000380518 ST3GAL2Q16842 350 aa14.33□□□□□ -0.11
COL2A1-202ENST00000380518 PLAC9Q5JTB6 97 aa14.33□□□□□ -0.11
COL2A1-202ENST00000380518 NTNG2Q96CW9 530 aa14.33□□□□□ -0.11
COL2A1-202ENST00000380518 RBM38Q9H0Z9 239 aaKnown RBP14.33□□□□□ -0.11
COL2A1-202ENST00000380518 CYB5R1Q9UHQ9 305 aa14.33□□□□□ -0.11
COL2A1-202ENST00000380518 COX7A2P2O60397 106 aa14.33□□□□□ -0.12
COL2A1-202ENST00000380518 KRASP01116 189 aa14.33□□□□□ -0.12
COL2A1-202ENST00000380518 ANKRD37Q7Z713 158 aa14.33□□□□□ -0.12
COL2A1-202ENST00000380518 SPICQ8N5J4 248 aa14.33□□□□□ -0.12
COL2A1-202ENST00000380518 C17orf47Q8NEP4 570 aa14.33□□□□□ -0.12
COL2A1-202ENST00000380518 PLA2G2FQ9BZM2 168 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms