RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TMEM59Q9BXS4 323 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 PIGLQ9Y2B2 252 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 V9GYS6 101 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 FXYD6-FXYD2A0A087WZ82 144 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 A0A0U1RQV5 110 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 CDX4O14627 284 aaPredicted RBP6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 NDUFA2O43678 99 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 DHRS3O75911 302 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 B4GALT1P15291 398 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF84P51523 738 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 SEC61A1P61619 476 aaKnown RBP6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 MRPS34P82930 218 aaKnown RBP6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 ECH1Q13011 328 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 LIN54Q6MZP7 749 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF774Q6NX45 483 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 OR2W3Q7Z3T1 314 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 ADAD2Q8NCV1 583 aaKnown RBP6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 ABHD3Q8WU67 409 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 KCNE4Q8WWG9 221 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 PIGTQ969N2 578 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 SF3B5Q9BWJ5 86 aaKnown RBP6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 TMPRSS13Q9BYE2 586 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 STRADBQ9C0K7 418 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 FXYD6Q9H0Q3 95 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 CST11Q9H112 138 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 IFT46Q9NQC8 304 aa6.96□□□□□ -1.29
PDLIM5-204ENST00000380176 DISC1C4P0D8 188 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 CCSO14618 274 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 PRF1P14222 555 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 HIST1H1DP16402 221 aaKnown RBP6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 CRYGSP22914 178 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 ACKR3P25106 362 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 PTGFRP43088 359 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 SORDQ00796 357 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 MEF2DQ14814 521 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 KRBOX4Q5JUW0 171 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 STEAP2Q8NFT2 490 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 AKR7LQ8NHP1 331 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 CCDC107Q8WV48 283 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 SLC2A8Q9NY64 477 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 LRFN1Q9P244 771 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 PCNX2A6NKB5 2137 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 DOCK7Q96N67 2140 aa6.96□□□□□ -1.3
PDLIM5-204ENST00000380176 TRAV14DV4A0A0A6YYC5 116 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 SGCEO43556 437 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 SYNGR3O43761 229 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 NEURL1O76050 574 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 IGHV3-9P01782 118 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 HLA-AP01891 365 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 CHRM2P08172 466 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 FCGR2AP12318 317 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNF32P17041 273 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 DLSTP36957 453 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 GSK3AP49840 483 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 GFRA1P56159 465 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 PPP1R1AQ13522 171 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 PPA1Q15181 289 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 MICBQ29980 383 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 BEND4Q6ZU67 534 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 AAED1Q7RTV5 226 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 OR2V1Q8NHB1 315 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 PRRT1Q99946 306 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 TMEM38BQ9NVV0 291 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 UBQLN2Q9UHD9 624 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 PCDHGA1Q9Y5H4 931 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 LINC00862A6NCI5 91 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 MFNGO00587 321 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNHIT1O43257 154 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 DNPH1O43598 174 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 IFNA7P01567 189 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 PPP3CBP16298 524 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 SERPINA2P20848 420 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 CNR1P21554 472 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 ZBTB25P24278 435 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 THBS4P35443 961 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 CDCP2Q5VXM1 449 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 ABLIM2Q6H8Q1 611 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 SLC25A42Q86VD7 318 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 NAXDQ8IW45 347 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 GPR137CQ8N3F9 429 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 FAM109AQ8N4B1 249 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 OR4K15Q8NH41 348 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 MAFIPQ8WZ33 124 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 FBXW5Q969U6 566 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 NUDT16L1Q9BRJ7 211 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 DDA1Q9BW61 102 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 CHST5Q9GZS9 411 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 MYOZ1Q9NP98 299 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 GPR173Q9NS66 373 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 R4GN57 208 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 HMSDA8MTL9 139 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 SCGNO76038 276 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 MGMTP16455 207 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 AKR1C4P17516 323 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 RPS27AP62979 156 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 SRYQ05066 204 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 IKZF1Q13422 519 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 HLXQ14774 488 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 MPPED2Q15777 294 aa6.95□□□□□ -1.3
PDLIM5-204ENST00000380176 CEACAM16Q2WEN9 425 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms