RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 C4orf46Q504U0 113 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 MOB3CQ70IA8 216 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 ASCL5Q7RTU5 278 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 PIAS4Q8N2W9 510 aaPredicted RBP12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 UXS1Q8NBZ7 420 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 OR5M9Q8NGP3 310 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 GMPPAQ96IJ6 420 aaPredicted RBP12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 TMEM246Q9BRR3 403 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 NPDC1Q9NQX5 325 aaPredicted RBP12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 MGAT4CQ9UBM8 478 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 SLC7A11Q9UPY5 501 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 PLEKHA6Q9Y2H5 1048 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 RIF1Q5UIP0 2472 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 LAMA5O15230 3695 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 MEIKINA0A087WXM9 373 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF816-ZNF321PA0A0X1KG74 233 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 KLK10O43240 276 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 IL18BPO95998 194 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 CD74P04233 296 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 BLVRBP30043 206 aaPredicted RBP12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 ZP1P60852 638 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 MALLQ13021 153 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF626Q68DY1 528 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 ZADH2Q8N4Q0 377 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 MED30Q96HR3 178 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 SLC6A7Q99884 636 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 CHIAQ9BZP6 476 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 METTL9Q9H1A3 318 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 KCNN3Q9UGI6 736 aa12.81□□□□□ -0.36
RAB3IP-203ENST00000378809 IGKV1-27A0A075B6S5 117 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 TMEM82A0PJX8 343 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 FAM172BPA6NC97 362 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 RAD51DO75771 328 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 HTR3BO95264 441 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 IFNA6P05013 189 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 CPT2P23786 658 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 MECP2P51608 486 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 CXADRP78310 365 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 OR8B8Q15620 311 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 NCCRP1Q6ZVX7 275 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 MRPL21Q7Z2W9 205 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 OR1K1Q8NGR3 316 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 CYYR1Q96J86 154 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 HYLS1Q96M11 299 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 SLC25A21Q9BQT8 299 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 GP6Q9HCN6 339 aa12.8□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF850A8MQ14 1090 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 SNRPGP15A8MWD9 76 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 MFNGO00587 321 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 PMP2P02689 132 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF735P0CB33 412 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 COX5BP10606 129 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 APLNRP35414 380 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 OR3A2P47893 321 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 GK2Q14410 553 aaPredicted RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 NKAPLQ5M9Q1 402 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 TMEM42Q69YG0 159 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 COLCA1Q6ZS62 124 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 LIX1LQ8IVB5 337 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 ZFAND1Q8TCF1 268 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 NANOS1Q8WY41 292 aaKnown RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 SPSB4Q96A44 273 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 PRRT1Q99946 306 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 PAPOLGQ9BWT3 736 aaKnown RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 COL25A1Q9BXS0 654 aaPredicted RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 CHST6Q9GZX3 395 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 RANBP3Q9H6Z4 567 aaPredicted RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 HSPB11Q9Y547 144 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 FREM1Q5H8C1 2179 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 URB1O60287 2271 aaKnown RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 MUC6Q6W4X9 2439 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 EFSO43281 561 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 SS18L1O75177 396 aaPredicted RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 FUT6P51993 359 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 ATP1B3P54709 279 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 UBE2MP61081 183 aaKnown RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 SNRPD2P62316 118 aaKnown RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 HLXQ14774 488 aaPredicted RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 PNLIPRP3Q17RR3 467 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 SLC36A1Q7Z2H8 476 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 FAM89BQ8N5H3 189 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 CNEP1R1Q8N9A8 125 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 OR56B2PQ8NGI1 322 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 OR4K15Q8NH41 348 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 CCDC107Q8WV48 283 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 APOBEC3DQ96AK3 386 aaPredicted RBP12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 OR51B6Q9H340 312 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 PTTG3PQ9NZH4 202 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 CLCF1Q9UBD9 225 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 FRYQ5TBA9 3013 aa12.79□□□□□ -0.36
RAB3IP-203ENST00000378809 AQP7O14520 342 aa12.78□□□□□ -0.36
RAB3IP-203ENST00000378809 CEACAM4O75871 244 aa12.78□□□□□ -0.36
RAB3IP-203ENST00000378809 TOXO94900 526 aa12.78□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF169Q14929 603 aaPredicted RBP12.78□□□□□ -0.36
RAB3IP-203ENST00000378809 ASCC1Q8N9N2 400 aaKnown RBP12.78□□□□□ -0.36
RAB3IP-203ENST00000378809 OR2T35Q8NGX2 323 aa12.78□□□□□ -0.36
RAB3IP-203ENST00000378809 ZNF431Q8TF32 576 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms