RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 HSPB2Q16082 182 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 KIAA1958Q8N8K9 716 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 LRP12Q9Y561 859 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 KNTC1P50748 2209 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 IDSB3KWA1 339 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF596Q8TC21 504 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 LHX4Q969G2 390 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 SLC35E1Q96K37 410 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 WDFY2Q96P53 400 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 NUDT9Q9BW91 350 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 CHST6Q9GZX3 395 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 B9D1Q9UPM9 204 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 PPICP45877 212 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 ZNF816Q0VGE8 651 aaPredicted RBP10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 MRPL58Q14197 206 aaKnown RBP10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 SLC38A6Q8IZM9 456 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 NUP37Q8NFH4 326 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 OR10P1Q8NGE3 313 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 OR10D4PQ8NGN7 298 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 TMEM208Q9BTX3 173 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 LIN7CQ9NUP9 197 aaKnown RBP10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 TBPP20226 339 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 TPPP2P59282 170 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 TMEM267Q0VDI3 215 aaPredicted RBP10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 AKR7LQ8NHP1 331 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 PRO1933Q9H354 126 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 TBX21Q9UL17 535 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 UBE2L5PA0A1B0GUS4 154 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 FRG2CA6NGY1 282 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 WDR1O75083 606 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 OR5H8P0DN80 308 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 DHODHQ02127 395 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 RNFT1Q5M7Z0 435 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 TNFRSF10CO14798 259 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 NDUFB6O95139 128 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 FCER1GP30273 86 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 CDC20BQ86Y33 519 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 MORN4Q8NDC4 146 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 KTI12Q96EK9 354 aaPredicted RBP10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 UCK1Q9HA47 277 aa10.77□□□□□ -0.69
PCDHA9-201ENST00000378122 PRRC2BQ5JSZ5 2229 aaKnown RBP10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 ASXL3Q9C0F0 2248 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 PLRG1O43660 514 aaKnown RBP10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 APELAP0DMC3 54 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 OR52N4Q8NGI2 321 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 NT5CQ8TCD5 201 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 ADAMTSL3P82987 1691 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 RAC1P63000 192 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 GUK1Q16774 197 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 UBALD1Q8TB05 177 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 EXOGQ9Y2C4 368 aaKnown RBP10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 HAAOP46952 286 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 RPL7L1Q6DKI1 246 aaKnown RBP10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 NPEPL1Q8NDH3 523 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 NOXO1Q8NFA2 376 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 RND1Q92730 232 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 ERGIC1Q969X5 290 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 TMPRSS5Q9H3S3 457 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 TRAPPC1Q9Y5R8 145 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 MTCH2Q9Y6C9 303 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 SHISA8B8ZZ34 492 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 K7EQS6 105 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 GLRA1P23415 457 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 MPGP29372 298 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 WNT3P56703 355 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 WFDC3Q8IUB2 231 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 MUC20Q8N307 709 aaPredicted RBP10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 DPF1Q92782 380 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 CRISPLD2Q9H0B8 497 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 TRGV5A0A0B4J1U4 118 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 DSCR3O14972 297 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 FZD6O60353 706 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 PNPP00491 289 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 SELENOPP49908 381 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 LHX8Q68G74 356 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 ZDHHC23Q8IYP9 409 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 ZDHHC11Q9H8X9 412 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 P4HTMQ9NXG6 502 aa10.76□□□□□ -0.69
PCDHA9-201ENST00000378122 TRAV17A0A0B4J275 112 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 GABRG2P18507 467 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 ATF1P18846 271 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 MEOX1P50221 254 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 OSR2Q8N2R0 312 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 TMPRSS13Q9BYE2 586 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 H0YIG0 161 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 TERTO14746 1132 aaKnown RBP10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 MSRB3Q8IXL7 192 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 SLC2A8Q9NY64 477 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 ST3GAL6Q9Y274 331 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 ARR3P36575 388 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 SUB1P53999 127 aaKnown RBP eCLIP10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 CLDN15P56746 228 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 ELFN2Q5R3F8 820 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 TMEM65Q6PI78 240 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 SLC16A13Q7RTY0 426 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 CCL17Q92583 94 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 CMBLQ96DG6 245 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 KCNE1BA0A087WTH5 132 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 METTL12A8MUP2 240 aa10.75□□□□□ -0.69
PCDHA9-201ENST00000378122 FOXF1Q12946 379 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms