RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 ABCB9Q9NP78 766 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 CYSLTR2Q9NS75 346 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 NKIRAS2Q9NYR9 191 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 DAPK2Q9UIK4 370 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 NOP16Q9Y3C1 178 aaKnown RBP11.04□□□□□ -0.64
CBWD3-203ENST00000377344 LRRK2Q5S007 2527 aa11.04□□□□□ -0.64
CBWD3-203ENST00000377344 NOTOA8MTQ0 251 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 B9A039 149 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 F5H5P2 479 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 M0R233 179 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 MLNRO43193 412 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 GOSR1O95249 250 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 PLATP00750 562 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 EVX1P49640 407 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 ATP1B3P54709 279 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 KISS1Q15726 138 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 IDNKQ5T6J7 187 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 SFXN4Q6P4A7 337 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 LHFPL2Q6ZUX7 228 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 KRT74Q7RTS7 529 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 RNF144BQ7Z419 303 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 OR5D18Q8NGL1 313 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 ELMOD3Q96FG2 381 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 CLEC4MQ9H2X3 399 aaPredicted RBP11.03□□□□□ -0.64
CBWD3-203ENST00000377344 FAIMQ9NVQ4 179 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 PLCE1Q9P212 2302 aa11.03□□□□□ -0.64
CBWD3-203ENST00000377344 A0A0G2JK05 382 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 CTAG2O75638 210 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 ALDOBP05062 364 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 SLC2A2P11168 524 aaPredicted RBP11.02□□□□□ -0.64
CBWD3-203ENST00000377344 PRF1P14222 555 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 THBS2P35442 1172 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 SNRPD2P62316 118 aaKnown RBP11.02□□□□□ -0.64
CBWD3-203ENST00000377344 GNG3P63215 75 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 EFNB3Q15768 340 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 DGUOKQ16854 277 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 TMEM200AQ86VY9 491 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 ANGPTL5Q86XS5 388 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 PNLDC1Q8NA58 520 aaKnown RBP11.02□□□□□ -0.64
CBWD3-203ENST00000377344 FOXRED1Q96CU9 486 aaPredicted RBP11.02□□□□□ -0.64
CBWD3-203ENST00000377344 CPNE2Q96FN4 548 aaPredicted RBP11.02□□□□□ -0.64
CBWD3-203ENST00000377344 SORCS2Q96PQ0 1159 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 BARHL1Q9BZE3 327 aa11.02□□□□□ -0.64
CBWD3-203ENST00000377344 FGF23Q9GZV9 251 aaPredicted RBP11.02□□□□□ -0.64
CBWD3-203ENST00000377344 METTL17Q9H7H0 456 aaPredicted RBP11.02□□□□□ -0.64
CBWD3-203ENST00000377344 IGKV1-27A0A075B6S5 117 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 PQLC2LA1A4F0 135 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 TRIM64BA6NI03 449 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 OR5B21A6NL26 309 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 IFITM5A6NNB3 132 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 GRPP07492 148 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 HAAOP46952 286 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 POU3F4P49335 361 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 CLDN12P56749 244 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 MST1LQ2TV78 715 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 AGAP6Q5VW22 663 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 CROCCP3Q8IVE0 287 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 ZCCHC24Q8N2G6 241 aaKnown RBP11.02□□□□□ -0.65
CBWD3-203ENST00000377344 SPERTQ8NA61 448 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 CXXC4Q9H2H0 198 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 CNTD2Q9H8S5 307 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 C14orf119Q9NWQ9 140 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 CCDC59Q9P031 241 aaKnown RBP11.02□□□□□ -0.65
CBWD3-203ENST00000377344 ZDHHC8Q9ULC8 765 aa11.02□□□□□ -0.65
CBWD3-203ENST00000377344 SPTAN1Q13813 2472 aaKnown RBP11.02□□□□□ -0.65
CBWD3-203ENST00000377344 ROS1P08922 2347 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 C17orf100A8MU93 164 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 AIPO00170 330 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 TPD52L2O43399 206 aaKnown RBP11.01□□□□□ -0.65
CBWD3-203ENST00000377344 IGHV1-46P01743 117 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 TNFSF4P23510 183 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 HTR2CP28335 458 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 OR3A4PP47883 348 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 MZT1Q08AG7 82 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 P2RY14Q15391 338 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 RAB11BQ15907 218 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 AWAT2Q6E213 333 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 TNFAIP8L1Q8WVP5 186 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 S100A13Q99584 98 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 UQCC2Q9BRT2 126 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 LIN7BQ9HAP6 207 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 PLEKHB1Q9UF11 243 aaPredicted RBP11.01□□□□□ -0.65
CBWD3-203ENST00000377344 LAMP3Q9UQV4 416 aa11.01□□□□□ -0.65
CBWD3-203ENST00000377344 HRNRQ86YZ3 2850 aaPredicted RBP11.01□□□□□ -0.65
CBWD3-203ENST00000377344 A0A0B4J203 849 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 LOC100289279A0A1B0GTE1 492 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 FAM221AA4D161 298 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 SLC17A2O00624 439 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 SPRY1O43609 319 aaPredicted RBP11□□□□□ -0.65
CBWD3-203ENST00000377344 SOD3P08294 240 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 TMEM225BP0DP42 221 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 CCL8P80075 99 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 TNFAIP6P98066 277 aaPredicted RBP11□□□□□ -0.65
CBWD3-203ENST00000377344 MAB21L1Q13394 359 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 SWI5Q1ZZU3 235 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 HAGHLQ6PII5 290 aaPredicted RBP11□□□□□ -0.65
CBWD3-203ENST00000377344 CALHM1Q8IU99 346 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 CDH26Q8IXH8 852 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 ZNF611Q8N823 705 aa11□□□□□ -0.65
CBWD3-203ENST00000377344 OR4D6Q8NGJ1 314 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms