RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ACTBL2Q562R1 376 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 ESCO2Q56NI9 601 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 LYG2Q86SG7 212 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 IL22RA1Q8N6P7 574 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 WNT5BQ9H1J7 359 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 NAT1P18440 290 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 CPT2P23786 658 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 CBX5P45973 191 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 PRSS12P56730 875 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 CLDN18P56856 261 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 IL13RA1P78552 427 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 IKZF1Q13422 519 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 GK2Q14410 553 aaPredicted RBP17.63■□□□□ 0.41
VSX1-202ENST00000376709 LY6G6FQ5SQ64 297 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 TSPO2Q5TGU0 170 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 PLXDC2Q6UX71 529 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 DEFB124Q8NES8 71 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 FGFBP3Q8TAT2 258 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 SPSB1Q96BD6 273 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 CYYR1Q96J86 154 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 IP6K3Q96PC2 410 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 OCSTAMPQ9BR26 566 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 SLC6A15Q9H2J7 730 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 KCNN3Q9UGI6 736 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 ANAPC10Q9UM13 185 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 MED13Q9UHV7 2174 aa17.63■□□□□ 0.41
VSX1-202ENST00000376709 ZNF318Q5VUA4 2279 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 TMEM225BP0DP42 221 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 AKR1C4P17516 323 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 VAMP1P23763 118 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 ZBTB25P24278 435 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 S100A11P31949 105 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 OR5M8Q8NGP6 311 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 FBXW5Q969U6 566 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 CPNE2Q96FN4 548 aaPredicted RBP17.62■□□□□ 0.41
VSX1-202ENST00000376709 SLX1AQ9BQ83 275 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 ST6GALNAC5Q9BVH7 336 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 EP300Q09472 2414 aaPredicted RBP17.62■□□□□ 0.41
VSX1-202ENST00000376709 DMXL1Q9Y485 3027 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 IGKV3D-15A0A087WSY6 115 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 FAM230AA0A1W2PPH8 454 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 SYNGR4O95473 234 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 AMY2BP19961 511 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 P2RX3P56373 397 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 CNN3Q15417 329 aaKnown RBP17.62■□□□□ 0.41
VSX1-202ENST00000376709 LPCAT3Q6P1A2 487 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 FAHD2BQ6P2I3 314 aaPredicted RBP17.62■□□□□ 0.41
VSX1-202ENST00000376709 ARRDC1Q8N5I2 433 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 OR5H2Q8NGV7 314 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 MARCH1Q8TCQ1 289 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 FAHD2AQ96GK7 314 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 FER1L6-AS2Q96M78 137 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 PDCD10Q9BUL8 212 aa17.62■□□□□ 0.41
VSX1-202ENST00000376709 C9orf170A2RU37 121 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 PPP3CBP16298 524 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 RAB14P61106 215 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 KRTAP27-1Q3LI81 207 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 CLLU1Q5K131 121 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 VAX1Q5SQQ9 334 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 HOGA1Q86XE5 327 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 ADAD2Q8NCV1 583 aaKnown RBP17.61■□□□□ 0.41
VSX1-202ENST00000376709 TERB2Q8NHR7 220 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 PHB2Q99623 299 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 PECRQ9BY49 303 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 FAM117AQ9C073 453 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 ARL6Q9H0F7 186 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.61■□□□□ 0.41
VSX1-202ENST00000376709 ZNF391Q9UJN7 358 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 MCTS1Q9ULC4 181 aaKnown RBP17.61■□□□□ 0.41
VSX1-202ENST00000376709 AUP1Q9Y679 476 aa17.61■□□□□ 0.41
VSX1-202ENST00000376709 ZNF708P17019 499 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 GABRR1P24046 479 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 ATP1A1-AS1Q5TC04 95 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 C3P1Q6ZMU1 363 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 TMUB2Q71RG4 321 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 TMEM251Q8N6I4 163 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 TM2D1Q9BX74 207 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 PRRG4Q9BZD6 226 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 FN3KRPQ9HA64 309 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 PARPBPQ9NWS1 579 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 ZNF230Q9UIE0 474 aaPredicted RBP17.6■□□□□ 0.41
VSX1-202ENST00000376709 SPAARA0A1B0GVQ0 90 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 FOXI3A8MTJ6 420 aaPredicted RBP17.6■□□□□ 0.41
VSX1-202ENST00000376709 SERPINE3A8MV23 424 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 PLATP00750 562 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 IL2RAP01589 272 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 PRKACBP22694 351 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 ARL6IP1Q15041 203 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 PABPC1L2AQ5JQF8 200 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 TUSC5Q8IXB3 177 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 CASTOR1Q8WTX7 329 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 RGCCQ9H4X1 137 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 CALHM2Q9HA72 323 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 SLC7A10Q9NS82 523 aa17.6■□□□□ 0.41
VSX1-202ENST00000376709 RFPL4AA6NLU0 287 aa17.59■□□□□ 0.41
VSX1-202ENST00000376709 RFPL4AL1F8VTS6 287 aa17.59■□□□□ 0.41
VSX1-202ENST00000376709 CCSO14618 274 aa17.59■□□□□ 0.41
VSX1-202ENST00000376709 RP2O75695 350 aa17.59■□□□□ 0.41
VSX1-202ENST00000376709 CSTBP04080 98 aaKnown RBP17.59■□□□□ 0.41
VSX1-202ENST00000376709 OR3A2P47893 321 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms