RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PLBD1Q6P4A8 553 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 ZNF788Q6ZQV5 615 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 THAP5Q7Z6K1 395 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 KRT77Q7Z794 578 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 PIGCQ92535 297 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 CHID1Q9BWS9 393 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 MROQ9BYG7 248 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 SIRT7Q9NRC8 400 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 PDP1Q9P0J1 537 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-204ENST00000376643 NLKQ9UBE8 527 aa12.13□□□□□ -0.47
HDAC6-204ENST00000376643 A0A0U1RQV5 110 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 ANKRD61A6NGH8 418 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 SLC22A31A6NKX4 558 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 AQP12BA6NM10 295 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 GSC2O15499 205 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 TSPAN9O75954 239 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 ACAA1P09110 424 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-204ENST00000376643 OSMP13725 252 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 ANXA8P13928 327 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 NDUFB7P17568 137 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 ANOS1P23352 680 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 DCTDP32321 178 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 ZNF829Q3KNS6 432 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-204ENST00000376643 COMMD2Q86X83 199 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 AQP12AQ8IXF9 295 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 PDZD9Q8IXQ8 264 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 IQCF1Q8N6M8 205 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 ANGPTL6Q8NI99 470 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 ASB17Q8WXJ9 295 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 TAF15Q92804 592 aaKnown RBP eCLIP12.12□□□□□ -0.475e-10■□□□□ 10.5
HDAC6-204ENST00000376643 RBM4BQ9BQ04 359 aaKnown RBP12.12□□□□□ -0.47
HDAC6-204ENST00000376643 YIPF3Q9GZM5 350 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 C1orf21Q9H246 121 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 MED20Q9H944 212 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 VNN3Q9NY84 501 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 RASL12Q9NYN1 266 aa12.12□□□□□ -0.47
HDAC6-204ENST00000376643 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDAC6-204ENST00000376643 PKD1L1Q8TDX9 2849 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 MEIOCA2RUB1 952 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 OR2AT4A6NND4 320 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 ZNF254O75437 659 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 MTRF1O75570 445 aaKnown RBP12.11□□□□□ -0.47
HDAC6-204ENST00000376643 GABRA2P47869 451 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 ACTR3P61158 418 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 RIPPLY1Q0D2K3 151 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 GINS1Q14691 196 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 AANATQ16613 207 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 SMIM21Q3B7S5 101 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 CEACAM21Q3KPI0 293 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 KRT74Q7RTS7 529 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 OR5A2Q8NGI9 324 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 RPL3LQ92901 407 aaKnown RBP12.11□□□□□ -0.47
HDAC6-204ENST00000376643 CCDC124Q96CT7 223 aaKnown RBP12.11□□□□□ -0.47
HDAC6-204ENST00000376643 GAFA1Q96PS6 74 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 SNTG1Q9NSN8 517 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 ZNF319Q9P2F9 582 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 LRP12Q9Y561 859 aa12.11□□□□□ -0.47
HDAC6-204ENST00000376643 A0A0G2JK05 382 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 TMEM269A0A1B0GVZ9 245 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 H0YAE9 185 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 RNASEK-C17orf49H0YIS7 233 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 AKR7A2O43488 359 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 FCN3O75636 299 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 ACKR3P25106 362 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 SAA4P35542 130 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 GPM6AP51674 278 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 GMFBP60983 142 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 LIAT1Q6ZQX7 453 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 Q6ZSV7 163 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 CPOQ8IVL8 374 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 CCDC197Q8NCU1 140 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 BEND2Q8NDZ0 799 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 OR8B12Q8NGG6 310 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 OR51G2Q8NGK0 314 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 AMELYQ99218 206 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 MOB1AQ9H8S9 216 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 ENPP5Q9UJA9 477 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 POLDIP2Q9Y2S7 368 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 TRRAPQ9Y4A5 3859 aa12.1□□□□□ -0.47
HDAC6-204ENST00000376643 A0A1B0GW55 424 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 SLC1A7O00341 560 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 SELENOFO60613 162 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 DUX4L2P0CJ85 424 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 DUX4L3P0CJ86 424 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 DUX4L4P0CJ87 422 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 DUX4L5P0CJ88 424 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 DUX4L6P0CJ89 424 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 DUX4L7P0CJ90 424 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 ALOX5APP20292 161 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 GABRA5P31644 462 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 CAPZA1P52907 286 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 CDK5Q00535 292 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 MS4A2Q01362 244 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 SRSF4Q08170 494 aaKnown RBP12.09□□□□□ -0.47
HDAC6-204ENST00000376643 DGUOKQ16854 277 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 ASPHD2Q6ICH7 369 aa12.09□□□□□ -0.47
HDAC6-204ENST00000376643 DUX4L9Q6RFH8 374 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-204ENST00000376643 Q6ZTK2 550 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms