RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ALDH3B1P43353 468 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 RANBP1P43487 201 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 ATP1B3P54709 279 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 SNRPD2P62316 118 aaKnown RBP19.52■□□□□ 0.72
HLA-C-202ENST00000376237 GNG3P63215 75 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 OR52N4Q8NGI2 321 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 HPSE2Q8WWQ2 592 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 SLC25A46Q96AG3 418 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 CXXC4Q9H2H0 198 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 CLEC4MQ9H2X3 399 aaPredicted RBP19.52■□□□□ 0.72
HLA-C-202ENST00000376237 METTL17Q9H7H0 456 aaPredicted RBP19.52■□□□□ 0.72
HLA-C-202ENST00000376237 CBLN4Q9NTU7 201 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 C14orf119Q9NWQ9 140 aa19.52■□□□□ 0.72
HLA-C-202ENST00000376237 PLEKHB1Q9UF11 243 aaPredicted RBP19.52■□□□□ 0.72
HLA-C-202ENST00000376237 ZSCAN5BA6NJL1 495 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 NOTOA8MTQ0 251 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 ZNF93P35789 620 aaPredicted RBP19.51■□□□□ 0.71
HLA-C-202ENST00000376237 MTCP1P56278 107 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 KISS1Q15726 138 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 OR2Z1Q8NG97 314 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 NPRL2Q8WTW4 380 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 UQCC2Q9BRT2 126 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 FAM230AA0A1W2PPH8 454 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 PQLC2LA1A4F0 135 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 TMEM210A6NLX4 147 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 C17orf100A8MU93 164 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 CLEC2LP0C7M8 214 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 DANCRP0C864 163 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 TNFSF4P23510 183 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 RORCP51449 518 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 FAM76BQ5HYJ3 339 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 DMRTC1Q5HYR2 192 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 DTX2Q86UW9 622 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 CELF2-AS1Q8N7Q2 184 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 TRMT10AQ8TBZ6 339 aaKnown RBP19.51■□□□□ 0.71
HLA-C-202ENST00000376237 DYNC2LI1Q8TCX1 351 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 ELMOD3Q96FG2 381 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 SORCS2Q96PQ0 1159 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 DYNLRB1Q9NP97 96 aa19.51■□□□□ 0.71
HLA-C-202ENST00000376237 ZNF732B4DXR9 585 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 H0YL77 283 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 SOX6P35712 828 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 GPM6AP51674 278 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 OR10A3P58181 314 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 LYPD6Q86Y78 171 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 ZNF573Q86YE8 665 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 JAGN1Q8N5M9 183 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 PNLDC1Q8NA58 520 aaKnown RBP19.5■□□□□ 0.71
HLA-C-202ENST00000376237 OR10AD1Q8NGE0 317 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 GPER1Q99527 375 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 GFI1Q99684 422 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 UBTD1Q9HAC8 227 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 TENM4Q6N022 2769 aa19.5■□□□□ 0.71
HLA-C-202ENST00000376237 ABCA4P78363 2273 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 IFITM5A6NNB3 132 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 SPRY3O43610 288 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 NAT2P11245 290 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 CFPP27918 469 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 CD200P41217 278 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 RIN1Q13671 783 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 FAM209AQ5JX71 171 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 C1orf100Q5SVJ3 147 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 SFXN4Q6P4A7 337 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 NR2C2APQ86WQ0 139 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 DVL3Q92997 716 aaPredicted RBP19.49■□□□□ 0.71
HLA-C-202ENST00000376237 IL19Q9UHD0 177 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 PMF1-BGLAPU3KQ54 211 aa19.49■□□□□ 0.71
HLA-C-202ENST00000376237 A0A0G2JK05 382 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 AIPO00170 330 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 IGHV1-46P01743 117 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 CD55P08174 381 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 THBS2P35442 1172 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 SRP9P49458 86 aaKnown RBP19.48■□□□□ 0.71
HLA-C-202ENST00000376237 PPOXP50336 477 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 HNRNPA0Q13151 305 aaKnown RBP19.48■□□□□ 0.71
HLA-C-202ENST00000376237 PCGF3Q3KNV8 242 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 C20orf204Q6ZNR8 217 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 OR6M1Q8NGM8 313 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 FGF23Q9GZV9 251 aaPredicted RBP19.48■□□□□ 0.71
HLA-C-202ENST00000376237 PLEKHF2Q9H8W4 249 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 PLGRKTQ9HBL7 147 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 ROS1P08922 2347 aa19.48■□□□□ 0.71
HLA-C-202ENST00000376237 LRP5LA4QPB2 252 aa19.47■□□□□ 0.71
HLA-C-202ENST00000376237 F5H5P2 479 aa19.47■□□□□ 0.71
HLA-C-202ENST00000376237 SLC17A2O00624 439 aa19.47■□□□□ 0.71
HLA-C-202ENST00000376237 PTBP3O95758 552 aaKnown RBP19.47■□□□□ 0.71
HLA-C-202ENST00000376237 ZNF182P17025 639 aaPredicted RBP19.47■□□□□ 0.71
HLA-C-202ENST00000376237 COL8A1P27658 744 aa19.47■□□□□ 0.71
HLA-C-202ENST00000376237 MAB21L1Q13394 359 aa19.47■□□□□ 0.71
HLA-C-202ENST00000376237 TMEM200AQ86VY9 491 aa19.47■□□□□ 0.71
HLA-C-202ENST00000376237 ZNF295-AS1Q8N0V1 137 aa19.47■□□□□ 0.71
HLA-C-202ENST00000376237 GTF3AQ92664 365 aaKnown RBP19.47■□□□□ 0.71
HLA-C-202ENST00000376237 SPACA5Q96QH8 159 aa19.47■□□□□ 0.71
HLA-C-202ENST00000376237 TRAF4Q9BUZ4 470 aaPredicted RBP19.47■□□□□ 0.71
HLA-C-202ENST00000376237 MRI1Q9BV20 369 aa19.47■□□□□ 0.71
HLA-C-202ENST00000376237 CCDC59Q9P031 241 aaKnown RBP19.47■□□□□ 0.71
HLA-C-202ENST00000376237 USP9YO00507 2555 aaPredicted RBP19.47■□□□□ 0.71
HLA-C-202ENST00000376237 PKDREJQ9NTG1 2253 aa19.46■□□□□ 0.71
HLA-C-202ENST00000376237 IGKV1-27A0A075B6S5 117 aa19.46■□□□□ 0.71
HLA-C-202ENST00000376237 SMIM30A4D0T7 59 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms