RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 VWA1Q6PCB0 445 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 HSD17B10Q99714 261 aaKnown RBP12.3□□□□□ -0.44
COL4A1-201ENST00000375820 OR2M5A3KFT3 312 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 WNT1P04628 370 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 YBX1P67809 324 aaKnown RBP12.3□□□□□ -0.44
COL4A1-201ENST00000375820 DPTQ07507 201 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 MIDNQ504T8 468 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 PTOV1Q86YD1 416 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 PELI1Q96FA3 418 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 FAAP24Q9BTP7 215 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 A0A087WUJ7 227 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 PAX5Q02548 391 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 SRSF5Q13243 272 aaKnown RBP12.3□□□□□ -0.44
COL4A1-201ENST00000375820 OXA1LQ15070 435 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 ETFRF1Q6IPR1 90 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 OR6S1Q8NH40 331 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 MED30Q96HR3 178 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 TRGV5A0A0B4J1U4 118 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 ACSM4P0C7M7 580 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 TIAL1Q01085 375 aaKnown RBP eCLIP12.3□□□□□ -0.44
COL4A1-201ENST00000375820 BAP18Q8IXM2 172 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 TMEM208Q9BTX3 173 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 RHOFQ9HBH0 211 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 OR1A1Q9P1Q5 309 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 METTL12A8MUP2 240 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 KIAA1324LA8MWY0 1029 aaPredicted RBP12.3□□□□□ -0.44
COL4A1-201ENST00000375820 DNASE2O00115 360 aaPredicted RBP12.3□□□□□ -0.44
COL4A1-201ENST00000375820 RER1O15258 196 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 Q3ZCU0 254 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 ZNF766Q5HY98 468 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 ZNF429Q86V71 674 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 BCL2L2Q92843 193 aaPredicted RBP12.3□□□□□ -0.44
COL4A1-201ENST00000375820 ARHGAP5-AS1Q96IT6 56 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 AAMDCQ9H7C9 122 aa12.3□□□□□ -0.44
COL4A1-201ENST00000375820 SPP1P10451 314 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 EPXP11678 715 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 TOMM20LQ6UXN7 152 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 DEFB124Q8NES8 71 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 GABARAPL1Q9H0R8 117 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 RPL7P18124 248 aaKnown RBP12.29□□□□□ -0.44
COL4A1-201ENST00000375820 DHODHQ02127 395 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 MYPOPQ86VE0 399 aaPredicted RBP12.29□□□□□ -0.44
COL4A1-201ENST00000375820 MAFAQ8NHW3 353 aaPredicted RBP12.29□□□□□ -0.44
COL4A1-201ENST00000375820 NOL4LQ96MY1 436 aaPredicted RBP12.29□□□□□ -0.44
COL4A1-201ENST00000375820 CDCA4Q9BXL8 241 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 ALG1L2C9J202 215 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 SNCGO76070 127 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 PNPP00491 289 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 MBP02144 154 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 FUT6P51993 359 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 C3AR1Q16581 482 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 AANATQ16613 207 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 FOXB2Q5VYV0 432 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 NHLRC2Q8NBF2 726 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 TMEM18Q96B42 140 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 UQCC2Q9BRT2 126 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 LSM2Q9Y333 95 aaKnown RBP12.29□□□□□ -0.44
COL4A1-201ENST00000375820 CBR3O75828 277 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 ALX3O95076 343 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 ABCD3P28288 659 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 TCTAP57738 103 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 PPP1CBP62140 327 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 NHLH1Q02575 133 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 NHLH2Q02577 135 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 PRSS41Q7RTY9 318 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 OR1F12Q8NHA8 337 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 GPR87Q9BY21 358 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 PRO1933Q9H354 126 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 MASP2O00187 686 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 FKBP2P26885 142 aaKnown RBP12.29□□□□□ -0.44
COL4A1-201ENST00000375820 SRP14P37108 136 aaKnown RBP12.29□□□□□ -0.44
COL4A1-201ENST00000375820 TPPP2P59282 170 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 ZNF774Q6NX45 483 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 ZNF574Q6ZN55 896 aaPredicted RBP12.29□□□□□ -0.44
COL4A1-201ENST00000375820 HGDQ93099 445 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 SLC6A13Q9NSD5 602 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 OR5V1Q9UGF6 321 aa12.29□□□□□ -0.44
COL4A1-201ENST00000375820 ERRFI1Q9UJM3 462 aaPredicted RBP12.29□□□□□ -0.44
COL4A1-201ENST00000375820 HSBP1O75506 76 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 SRFP11831 508 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 MEOX1P50221 254 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 DSCR4P56555 118 aaPredicted RBP12.28□□□□□ -0.44
COL4A1-201ENST00000375820 C6orf201Q7Z4U5 140 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 ZNF683Q8IZ20 524 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 OR4C5Q8NGB2 326 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 CIB3Q96Q77 187 aaPredicted RBP12.28□□□□□ -0.44
COL4A1-201ENST00000375820 PLEKHA2Q9HB19 425 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 UFC1Q9Y3C8 167 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 NUP98P52948 1817 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 NEURL1O76050 574 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 ORM2P19652 201 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 RPEQ96AT9 228 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 MPZL1O95297 269 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 PNLIPRP2P54317 469 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 ETFDHQ16134 617 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 OR4C3Q8NH37 302 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 ZMIZ1Q9ULJ6 1067 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 R4GN57 208 aa12.28□□□□□ -0.44
COL4A1-201ENST00000375820 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms